CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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SHARPIN
(
Gorilla gorilla
)
RanBP ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00641 (zf-RanBP)
IPR001876
ENSGGOG00000027471
T26520_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSGGOP00000020631
RanBP ZF
347
373
PSWSCPSCTFINAPDRPGCEMCSTQRP
ENSGGOP00000024611
RanBP ZF
350
376
PSWSCPSCTFINAPDRPGCEMCSTQRP
Links
Other
RanBP ZF
family RBPs
Other
Gorilla gorilla
RBPs
20 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
SHARPIN
Homo sapiens
ENSG00000179526
N
1.000
SHARPIN
Macaca mulatta
ENSMMUG00000007152
N
0.926
LOC100065232
Equus caballus
ENSECAG00000001400
N
0.889
SHARPIN
Sus scrofa
ENSSSCG00000005914
N
0.889
SHARPIN
Cavia porcellus
ENSCPOG00000013242
N
0.852
SHARPIN
Bos taurus
ENSBTAG00000012235
N
0.852
Sharpin
Rattus norvegicus
ENSRNOG00000012812
N
0.852
LOC100392136
Callithrix jacchus
ENSCJAG00000021452
N
0.852
Sharpin
Mus musculus
ENSMUSG00000022552
N
0.852
SHARPIN
Monodelphis domestica
ENSMODG00000010491
N
0.786
ENSMGAG00000007903
Meleagris gallopavo
ENSMGAG00000007903
N
0.778
SHARPIN
Gallus gallus
ENSGALG00000022341
N
0.750
ENSTRUG00000006949
Takifugu rubripes
ENSTRUG00000006949
N
0.741
ENSORLG00000007392
Oryzias latipes
ENSORLG00000007392
N
0.714
SHARPIN
Anolis carolinensis
ENSACAG00000007245
N
0.714
CU693494.1
Danio rerio
ENSDARG00000076995
N
0.714
ENSGACG00000002544
Gasterosteus aculeatus
ENSGACG00000002544
N
0.714
ENSTRUG00000011046
Takifugu rubripes
ENSTRUG00000011046
N
0.704
ENSTNIG00000008521
Tetraodon nigroviridis
ENSTNIG00000008521
N
0.704