amel4_ncbi_hmm4222 (Apis mellifera)
YTH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF04146 (YTH) IPR007275 amel4_ncbi_hmm4222 T61916_0.6 DroSpeGe (2008-Jul-18)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
YTHDC1
M354_0.6 		Homo sapiens KVVURC SELEX
Cook et al.(2011)
969_20167602 		0.711
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
amel4_ncbi_hmm4222 YTH 246 342

Links

Other YTH family RBPs
Other Apis mellifera RBPs

52 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AAH84321 Xenopus laevis AAH84321 I 0.000
Ame_R018249 Ailuropoda melanoleuca Ame_R018249 I 0.701
ENSMODG00000004117 Monodelphis domestica ENSMODG00000004117 I 0.000
ENSMODG00000009173 Monodelphis domestica ENSMODG00000009173 I 0.000
ENSMODG00000010076 Monodelphis domestica ENSMODG00000010076 I 0.000
ENSMODG00000014337 Monodelphis domestica ENSMODG00000014337 I 0.000
ENSMODG00000020754 Monodelphis domestica ENSMODG00000020754 I 0.000
ENSPPYG00000014726 Pongo pygmaeus ENSPPYG00000014726 I 0.711
LOC100066303 Equus caballus ENSECAG00000018303 I 0.701
nasonia_NCBI_hmm460384 Nasonia vitripennis nasonia_NCBI_hmm460384 I 0.969
PHUM305930 Pediculus humanus PHUM305930 I 0.876
Q29RQ7_BOVIN Bos taurus ENSBTAG00000015572 I 0.711
XP_001181366.1 Strongylocentrotus purpuratus XP_001181366.1 I 0.742
XP_783255.2 Strongylocentrotus purpuratus XP_783255.2 I 0.742
Ythdc1 Rattus norvegicus ENSRNOG00000001996 I 0.711
YTHDC1 Pteropus vampyrus ENSPVAG00000015551 I 0.711
YTHDC1 Pan troglodytes ENSPTRG00000016105 I 0.711
YTHDC1 Tetraodon nigroviridis ENSTNIG00000013243 I 0.000
YTHDC1 Sorex araneus ENSSARG00000010960 I 0.711
YTHDC1 Tupaia belangeri ENSTBEG00000011546 I 0.711
YTHDC1 Taeniopygia guttata ENSTGUG00000004452 I 0.711
YTHDC1 Takifugu rubripes ENSTRUG00000010142 I 0.000
YTHDC1 Tarsius syrichta ENSTSYG00000011668 I 0.000
YTHDC1 Tursiops truncatus ENSTTRG00000005083 I 0.000
YTHDC1 Vicugna pacos ENSVPAG00000009040 I 0.711
ythdc1 Xenopus tropicalis ENSXETG00000017960 I 0.701
YTHDC1 Ochotona princeps ENSOPRG00000008986 I 0.711
YTHDC1 Otolemur garnettii ENSOGAG00000003362 I 0.701
YTHDC1 Canis familiaris ENSCAFG00000002821 I 0.701
YTHDC1 Cavia porcellus ENSCPOG00000010929 I 0.711
ythdc1 Danio rerio ENSDARG00000051953 I 0.732
YTHDC1 Dasypus novemcinctus ENSDNOG00000004949 I 0.000
Ythdc1 Dipodomys ordii ENSDORG00000013045 I 0.711
YTHDC1 Callithrix jacchus ENSCJAG00000009934 I 0.711
YTHDC1 Erinaceus europaeus ENSEEUG00000015466 I 0.711
YTHDC1 Homo sapiens ENSG00000083896 D 0.711
YTHDC1 Gasterosteus aculeatus ENSGACG00000015486 I 0.000
YTHDC1 Gorilla gorilla ENSGGOG00000021958 I 0.711
YTHDC1 Loxodonta africana ENSLAFG00000021592 I 0.701
YTHDC1 Meleagris gallopavo ENSMGAG00000010391 I 0.711
YTHDC1 Myotis lucifugus ENSMLUG00000016300 I 0.000
YTHDC1 Macaca mulatta ENSMMUG00000002265 I 0.711
Ythdc1 Mus musculus ENSMUSG00000035851 I 0.711
YTHDC1 Ornithorhynchus anatinus ENSOANG00000014398 I 0.701
YTHDC1 Oryctolagus cuniculus ENSOCUG00000015886 I 0.701
YTHDC1 Anolis carolinensis ENSACAG00000009697 I 0.000