BRADI4G08050 (Brachypodium distachyon)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 BRADI4G08050 T02009_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
BRADI4G08050.1 CCCH ZF 54 79
BRADI4G08050.1 CCCH ZF 99 124
BRADI4G08050.1 CCCH ZF 144 170
BRADI4G08050.1 CCCH ZF 306 332
BRADI4G08050.1 CCCH ZF 352 378
BRADI4G08050.4 CCCH ZF 54 79
BRADI4G08050.4 CCCH ZF 99 124
BRADI4G08050.4 CCCH ZF 144 170
BRADI4G08050.4 CCCH ZF 306 332
BRADI4G08050.4 CCCH ZF 352 378

Links

Other CCCH ZF family RBPs
Other Brachypodium distachyon RBPs

40 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
PK01281.1 Cannabis sativa PK01281.1 N 0.000
PK20504.1 Cannabis sativa PK20504.1 N 0.000
Glyma02g46760.1 Glycine max Glyma02g46760.1 N 0.000
Glyma08g43790.1 Glycine max Glyma08g43790.1 N 0.000
Glyma18g09020.1 Glycine max Glyma18g09020.1 N 0.000
MDP0000214614 Malus x domestica MDP0000214614 N 0.000
MDP0000906147 Malus x domestica MDP0000906147 N 0.000
cassava7063.valid.m1 Manihot esculenta cassava7063.valid.m1 N 0.000
cassava36931.valid.m1 Manihot esculenta cassava36931.valid.m1 N 0.000
cassava31400.valid.m1 Manihot esculenta cassava31400.valid.m1 N 0.000
cassava31399.valid.m1 Manihot esculenta cassava31399.valid.m1 N 0.000
cassava30652.valid.m1 Manihot esculenta cassava30652.valid.m1 N 0.000
cassava30651.valid.m1 Manihot esculenta cassava30651.valid.m1 N 0.000
cassava2158.valid.m1 Manihot esculenta cassava2158.valid.m1 N 0.000
Medtr5g102170 Medicago truncatula Medtr5g102170 N 0.000
Medtr3g077080 Medicago truncatula Medtr3g077080 N 0.000
B9IAR9_POPTR Populus trichocarpa POPTR_0014s16340 N 0.000
B9GTF9_POPTR Populus trichocarpa POPTR_0002s22240 N 0.000
ppa003564m Prunus persica ppa003564m N 0.000
ppa019338m Prunus persica ppa019338m N 0.000
27613.m000645 Ricinus communis 27613.m000645 N 0.000
GSVIVG00037782001 Vitis vinifera GSVIVG00037782001 N 0.000