CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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ZC3H15
(
Anolis carolinensis
)
CCCH ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00642 (zf-CCCH)
IPR000571
ENSACAG00000001916
T02219_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSACAP00000001849
CCCH ZF
75
100
PKSVVCAFYKQGQCTKGDKCKFSHDL
Links
Other
CCCH ZF
family RBPs
Other
Anolis carolinensis
RBPs
131 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
AAEL014033
Aedes aegypti
AAEL014033
I
0.000
CELF5
Anolis carolinensis
ENSACAG00000016959
I
0.000
AGAP004950
Anopheles gambiae
AGAP004950
I
0.000
amel4_ncbi_hmm7761
Apis mellifera
amel4_ncbi_hmm7761
I
0.000
BGIBMGA010431
Bombyx mori
BGIBMGA010431
I
0.000
CJA07020
Caenorhabditis japonica
CJA07020
I
0.000
LOC100414308
Callithrix jacchus
ENSCJAG00000018355
I
0.000
CELF5
Callithrix jacchus
ENSCJAG00000014799
I
0.000
CELF5
Cavia porcellus
ENSCPOG00000005740
I
0.000
GF10965
Drosophila ananassae
FBgn0088005
I
0.000
GG13757
Drosophila erecta
FBgn0106020
I
0.000
GH14684
Drosophila grimshawi
FBgn0122160
I
0.000
bru-3
Drosophila melanogaster
FBgn0262350
D
0.000
GI13095
Drosophila mojavensis
FBgn0135852
I
0.000
GL21647
Drosophila persimilis
FBgn0159240
I
0.000
GA28624-RA
Drosophila pseudoobscura
FBgn0249984
I
0.000
GM24582
Drosophila sechellia
FBgn0179445
I
0.000
GD12651
Drosophila simulans
FBgn0184378
I
0.000
GJ13842
Drosophila virilis
FBgn0201061
I
0.000
GK17101
Drosophila willistoni
FBgn0219100
I
0.000
GE20053
Drosophila yakuba
FBgn0237378
I
0.000
CELF5
Felis catus
ENSFCAG00000007127
N
0.000
A5A2G4_CHICK
Gallus gallus
ENSGALG00000001966
I
0.000
A5A2G2_CHICK
Gallus gallus
ENSGALG00000002413
I
0.000
CELF5
Gasterosteus aculeatus
ENSGACG00000012870
I
0.000
CELF6
Gasterosteus aculeatus
ENSGACG00000016626
I
0.000
ENSGGOG00000023049
Gorilla gorilla
ENSGGOG00000023049
I
0.000
90208
Helobdella robusta
90208
I
0.000
62054
Helobdella robusta
62054
I
0.000
BRUNOL6
Homo sapiens
ENSG00000140488
D
0.000
LOAG_05508
Loa loa
LOAG_05508
I
0.000
estExt_fgenesh2_pg.C_sca_1310025
Lottia gigantea
estExt_fgenesh2_pg.C_sca_1310025
I
0.000
CELF4
Loxodonta africana
ENSLAFG00000021352
I
0.000
HEXA
Macaca mulatta
ENSMMUG00000010687
I
0.000
CELF5
Macaca mulatta
ENSMMUG00000015513
I
0.000
CELF5
Microcebus murinus
ENSMICG00000003506
N
0.000
CELF5
Monodelphis domestica
ENSMODG00000019151
I
0.000
CELF6
Monodelphis domestica
ENSMODG00000001784
I
0.000
Celf6
Mus musculus
ENSMUSG00000032297
I
0.000
nasonia_NCBI_hmm496514
Nasonia vitripennis
nasonia_NCBI_hmm496514
I
0.000
CELF5
Ochotona princeps
ENSOPRG00000007881
I
0.000
CELF6
Ochotona princeps
ENSOPRG00000019169
I
0.000
CELF6
Ornithorhynchus anatinus
ENSOANG00000011308
I
0.000
CELF6
Oryzias latipes
ENSORLG00000013392
I
0.000
CELF6
Pan troglodytes
ENSPTRG00000034360
I
0.000
PHUM315130
Pediculus humanus
PHUM315130
I
0.000
Brunol4
Rattus norvegicus
ENSRNOG00000014503
I
0.000
Sjc_0024790
Schistosoma japonicum
Sjc_0024790
I
0.000
Smp_131780
Schistosoma mansoni
Smp_131780
I
0.000
Smp_041280
Schistosoma mansoni
Smp_041280
I
0.000
BRUNOL4
Taeniopygia guttata
ENSTGUG00000001649
I
0.000
CELF5
Takifugu rubripes
ENSTRUG00000017937
I
0.000
CELF3
Takifugu rubripes
ENSTRUG00000012064
I
0.000
CELF6
Takifugu rubripes
ENSTRUG00000012391
I
0.000
CELF5
Tetraodon nigroviridis
ENSTNIG00000010634
I
0.000
CELF3
Tupaia belangeri
ENSTBEG00000010130
I
0.000