CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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MBNL1
(
Felis catus
)
CCCH ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00642 (zf-CCCH)
IPR000571
ENSFCAG00000002293
T02602_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSFCAP00000002116
CCCH ZF
1
14
GRCSRENCKYLHPP
ENSFCAP00000002116
CCCH ZF
121
147
DRLEVCREYQRGNCNRGENDCRFAHPA
ENSFCAP00000002116
CCCH ZF
158
181
TVTVCMDYIKGRCSREKCKYFHPP
Links
Other
CCCH ZF
family RBPs
Other
Felis catus
RBPs
30 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
A5PJM0_BOVIN
Bos taurus
ENSBTAG00000004564
N
1.000
fgenesh2_pg.scaffold_81000033
Branchiostoma floridae
fgenesh2_pg.scaffold_81000033
N
0.000
fgenesh2_pg.scaffold_93000116
Branchiostoma floridae
fgenesh2_pg.scaffold_93000116
N
0.000
LOC100397507
Callithrix jacchus
ENSCJAG00000004080
I
0.866
MBNL3
Cavia porcellus
ENSCPOG00000008092
N
0.892
mbnl2
Danio rerio
ENSDARG00000018460
I
0.000
mbnl1
Danio rerio
ENSDARG00000052978
N
0.000
MBNL2
Dasypus novemcinctus
ENSDNOG00000018141
N
0.711
MBNL3
Echinops telfairi
ENSETEG00000015907
N
0.711
MBNL1
Echinops telfairi
ENSETEG00000016568
N
0.711
MBNL2
Equus caballus
ENSECAG00000020574
N
0.000
MBNL3
Erinaceus europaeus
ENSEEUG00000013021
N
0.000
A5HMN7_CHICK
Gallus gallus
ENSGALG00000006066
I
0.000
MBNL3
Homo sapiens
ENSG00000076770
I
0.866
MBNL1
Homo sapiens
ENSG00000152601
D
0.985
MBNL2
Macaca mulatta
ENSMMUG00000022744
N
0.711
MBNL3
Macaca mulatta
ENSMMUG00000003071
I
0.866
MBNL1
Monodelphis domestica
ENSMODG00000015838
I
0.000
MBNL3
Monodelphis domestica
ENSMODG00000015304
I
0.894
Mbnl3
Mus musculus
ENSMUSG00000036109
I
0.000
MBNL3
Ochotona princeps
ENSOPRG00000011179
N
0.000
MBNL3
Ornithorhynchus anatinus
ENSOANG00000011697
I
0.908
MBNL1
Otolemur garnettii
ENSOGAG00000009336
N
0.711
XR_020327.1
Pan troglodytes
ENSPTRG00000022280
N
0.000
MBNL3
Procavia capensis
ENSPCAG00000014188
N
0.862
MBNL3
Sus scrofa
ENSSSCG00000012676
N
0.892
MBNL3
Tupaia belangeri
ENSTBEG00000008063
N
0.877
mbnl3
Xenopus tropicalis
ENSXETG00000005409
I
0.819