AB07703.1 (Alternaria brassicicola)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 AB07703.1 T05931_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
AB07703.1 CCCH ZF 92 117

Links

Other CCCH ZF family RBPs
Other Alternaria brassicicola RBPs

145 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
DGIL_AUG5s16g7t1 Acyrtosiphon pisum DGIL_AUG5s16g7t1 N 0.769
Ame_R017931 Ailuropoda melanoleuca Ame_R017931 N 0.731
Aqu1.222312 Amphimedon queenslandica Aqu1.222312 N 0.731
amel4_ncbi_hmm11607 Apis mellifera amel4_ncbi_hmm11607 N 0.731
XM_002883888.1 Arabidopsis lyrata fgenesh2_kg.3__3143__AT2G20280.1 N 0.731
AT2G20280 Arabidopsis thaliana AT2G20280-TAIR-G N 0.731
ARB_01723 Arthroderma benhamiae ARB_01723 N 0.923
ACL082W Ashbya gossypii ACL082W N 0.769
fgenesh1_pg.00710_#_148 Aspergillus carbonarius fgenesh1_pg.00710_#_148 N 0.808
ACLA_016930 Aspergillus clavatus CADACLAG00000891 N 0.846
AFUA_5G13930 Aspergillus fumigatus CADAFUAG00006431 N 0.885
ANIA_06922 Aspergillus nidulans CADANIAG00007728 N 0.846
An14g05330 Aspergillus niger CADANGAG00011470 N 0.808
ATEG_06133 Aspergillus terreus CADATEAG00002525 N 0.885
BDBG_01641 Blastomyces dermatitidis BDBG_01641 N 0.846
ZC3HF_BOVIN Bos taurus ENSBTAG00000021762 N 0.731
BC1G_06447 Botrytis cinerea BC1G_06447 N 0.885
BRADI2G54220 Brachypodium distachyon BRADI2G54220 N 0.731
estExt_gwp.C_6160004 Branchiostoma floridae estExt_gwp.C_6160004 N 0.731
CBN11546 Caenorhabditis brenneri CBN11546 N 0.731
CBN03898 Caenorhabditis brenneri CBN03898 N 0.731
CBG00292 Caenorhabditis briggsae CBG00292 N 0.731
F27D4.4 Caenorhabditis elegans F27D4.4 N 0.731
CJA17052 Caenorhabditis japonica CJA17052 N 0.731
CRE20408 Caenorhabditis remanei CRE20408 N 0.731
ZC3H15 Callithrix jacchus ENSCJAG00000005931 N 0.731
CAGL0J08679g Candida glabrata CAGL0J08679g N 0.769
PGUG_02031 Candida guilliermondii PGUG_02031 N 0.731
CPAG_03559 Candida parapsilosis CPAG_03559 N 0.731
ZC3H15 Canis familiaris ENSCAFG00000014494 N 0.731
PK12342.1 Cannabis sativa PK12342.1 N 0.731
ENSCPOG00000012965 Cavia porcellus ENSCPOG00000012965 N 0.731
CHGG_07887 Chaetomium globosum CHGG_07887 N 0.808
ZC3H15 Choloepus hoffmanni ENSCHOG00000011958 N 0.731
ENSCING00000006888 Ciona intestinalis ENSCING00000006888 N 0.731
CIMG_09790 Coccidioides immitis CIMG_09790 N 0.885
CPSG_09723 Coccidioides posadasii CPSG_09723 N 0.885
estExt_Genewise1.C_60471 Cochliobolus heterostrophus C5 estExt_Genewise1.C_60471 N 1.000
CC1G_07829 Coprinopsis cinerea CC1G_07829 N 0.808
estExt_Genewise1.C_22051 Cryphonectria parasitica estExt_Genewise1.C_22051 N 0.923
CNBG_3113 Cryptococcus neoformans CNBG_3113 N 0.769
zc3h15 Danio rerio ENSDARG00000015889 N 0.769
DEHA0A09449g Debaryomyces hansenii DEHA0A09449g N 0.769
Zc3h15 Dipodomys ordii ENSDORG00000011664 N 0.731
GD10149 Drosophila simulans FBgn0181924 N 0.731
GK21573 Drosophila willistoni FBgn0223565 N 0.731
ENSETEG00000015556 Echinops telfairi ENSETEG00000015556 N 0.731
LOC100068634 Equus caballus ENSECAG00000017149 N 0.731
ZC3H15 Felis catus ENSFCAG00000008213 N 0.731
ZC3HF_CHICK Gallus gallus ENSGALG00000002670 N 0.731
ZC3H15 Gasterosteus aculeatus ENSGACG00000011648 N 0.769
Glyma19g36150.1 Glycine max Glyma19g36150.1 N 0.731
Glyma03g33420.1 Glycine max Glyma03g33420.1 N 0.731
Glyma10g05550.1 Glycine max Glyma10g05550.1 N 0.731
ZC3H15 Gorilla gorilla ENSGGOG00000000073 N 0.731
72073 Helobdella robusta 72073 N 0.769
HCAG_08348 Histoplasma capsulatum HCAG_08348 N 0.846
ZC3H15 Homo sapiens ENSG00000065548 N 0.731
KLLA0C13673g Kluyveromyces lactis KLLA0C13673g N 0.731
KLTH0G08162g Kluyveromyces thermotolerans KLTH0G08162g N 0.731
Kwal_2969 Kluyveromyces waltii Kwal_2969 N 0.731
SAKL0E09966g Lachancea kluyveri SAKL0E09966g N 0.769
estExt_Genewise1Plus.C_sca_2280007 Lottia gigantea estExt_Genewise1Plus.C_sca_2280007 N 0.769
chr5.LjT08O17.30.nd Lotus japonicus chr5.LjT08O17.30.nd N 0.731
ENSLAFG00000001563 Loxodonta africana ENSLAFG00000001563 N 0.731
ZC3H15 Macaca mulatta ENSMMUG00000017248 N 0.731
MGG_07010 Magnaporthe oryzae MGG_07010 N 0.962
MDP0000161236 Malus x domestica MDP0000161236 N 0.731
e_gw1.19.91.1 Melampsora laricis populina e_gw1.19.91.1 N 0.846
ZC3H15 Meleagris gallopavo ENSMGAG00000004447 N 0.731
Minc08580 Meloidogyne incognita Minc08580 N 0.769
ZC3H15 Microcebus murinus ENSMICG00000014245 N 0.731
MCYG_02954 Microsporum canis MCYG_02954 N 0.923
MGYG_00125 Microsporum gypseum MGYG_00125 N 0.923
ITGAV Monodelphis domestica ENSMODG00000010653 N 0.731
estExt_Genewise1.C_30385 Mucor circinelloides estExt_Genewise1.C_30385 N 0.808
Zc3h15 Mus musculus ENSMUSG00000027091 N 0.731
estExt_fgenesh1_pg.C_70448 Myceliophthora thermophila estExt_fgenesh1_pg.C_70448 N 0.846
estExt_Genewise1Plus.C_31385 Mycosphaerella fijiensis estExt_Genewise1Plus.C_31385 N 0.962
estExt_fgenesh1_pm.C_chr_90145 Mycosphaerella graminicola estExt_fgenesh1_pm.C_chr_90145 N 0.808
ZC3H15 Myotis lucifugus ENSMLUG00000007741 N 0.731
nasonia_NCBI_hmm1144383 Nasonia vitripennis nasonia_NCBI_hmm1144383 N 0.731
estExt_Genewise1Plus.C_sca_12_chr5_2_00446 Nectria haematococca estExt_Genewise1Plus.C_sca_12_chr5_2_00446 N 0.808
e_gw.53.202.1 Nematostella vectensis e_gw.53.202.1 N 0.731
NFIA_073040 Neosartorya fischeri CADNFIAG00007899 N 0.885
NCU01795 Neurospora crassa NCU01795 N 0.923
estExt_Genewise1.C_110154 Neurospora discreta estExt_Genewise1.C_110154 N 0.923
estExt_fgenesh1_pm.C_130118 Neurospora tetrasperma estExt_fgenesh1_pm.C_130118 N 0.923
ENSOPRG00000015790 Ochotona princeps ENSOPRG00000015790 N 0.731
ZC3H15 Ornithorhynchus anatinus ENSOANG00000015742 N 0.731
ENSOCUG00000011903 Oryctolagus cuniculus ENSOCUG00000011903 N 0.731
ZC3H15 Oryzias latipes ENSORLG00000018606 N 0.769
ZC3H15 Otolemur garnettii ENSOGAG00000002182 N 0.731
ZC3H15 Pan troglodytes ENSPTRG00000012717 N 0.731
PABG_07629 Paracoccidioides brasiliensis PABG_07629 N 0.885
Pc21g03130 Penicillium chrysogenum Pc21g03130 N 0.808
PMAA_036360 Penicillium marneffei PMAA_036360 N 0.846
gwh2.4.391.1 Phanerochaete chrysosporium gwh2.4.391.1 N 0.808
PDK_20s1366191g001 Phoenix dactylifera PDK_20s1366191g001 N 0.731
gw1.1.348.1 Phycomyces blakesleeanus gw1.1.348.1 N 0.769
PITG_04608 Phytophthora infestans PITG_04608 N 0.731
s_451242 Phytophthora sojae s_451242 N 0.731
e_gw1.8.939.1 Pleurotus ostreatus e_gw1.8.939.1 N 0.846
Pa_3_8730 Podospora anserina Pa_3_8730 N 0.962
ENSPPYG00000013004 Pongo pygmaeus ENSPPYG00000013004 N 0.731
B9MT73_POPTR Populus trichocarpa POPTR_0308s00200 N 0.731
POPTR_0006s13510 Populus trichocarpa POPTR_0006s13510 N 0.731
B9HM02_POPTR Populus trichocarpa POPTR_0008s04540 N 0.731
ZC3H15 Procavia capensis ENSPCAG00000008499 N 0.731
ppa007639m Prunus persica ppa007639m N 0.731
ZC3H15 Pteropus vampyrus ENSPVAG00000004828 N 0.731
PGTG_08922 Puccinia graminis PGTG_08922 N 0.846
PTTG_08784 Puccinia triticina PTTG_08784 N 0.808
Zc3h15 Rattus norvegicus ENSRNOG00000005256 N 0.731
29805.m001499 Ricinus communis 29805.m001499 N 0.731
Scas_Contig578.9 Saccharomyces castellii Scas_Contig578.9 N 0.769
SS1G_13466 Sclerotinia sclerotiorum SS1G_13466 N 0.885
ZC3H15 Sorex araneus ENSSARG00000012071 N 0.731
ZC3H15 Spermophilus tridecemlineatus ENSSTOG00000006873 N 0.731
e_gw1.2.668.1 Sporobolomyces roseus e_gw1.2.668.1 N 0.808
ZC3H15 Sus scrofa ENSSSCG00000016026 N 0.731
ZC3H15 Taeniopygia guttata ENSTGUG00000011131 N 0.731
ZC3H15 Takifugu rubripes ENSTRUG00000004988 N 0.769
ZC3H15 Tarsius syrichta ENSTSYG00000011019 N 0.731
ZC3H15 Tetraodon nigroviridis ENSTNIG00000009860 N 0.731
estExt_fgenesh2_kg.C_60126 Thielavia terrestris estExt_fgenesh2_kg.C_60126 N 0.846
estExt_fgenesh1_pg.C_40101 Trichoderma atroviride estExt_fgenesh1_pg.C_40101 N 0.808
estExt_Genewise1.C_210247 Trichoderma reesei estExt_Genewise1.C_210247 N 0.808
gw1.23.236.1 Trichoderma virens gw1.23.236.1 N 0.808
TEQG_08385 Trichophyton equinum TEQG_08385 N 0.923
TERG_01412 Trichophyton rubrum TERG_01412 N 0.923
TESG_03135 Trichophyton tonsurans TESG_03135 N 0.923
TRV_03417 Trichophyton verrucosum TRV_03417 N 0.923
ZC3H15 Tupaia belangeri ENSTBEG00000015530 N 0.731
ZC3H15 Tursiops truncatus ENSTTRG00000012425 N 0.731
UREG_04706 Uncinocarpus reesii UREG_04706 N 0.885
A7TLF2_VANPO Vanderwaltozyma polyspora A7TLF2_VANPO N 0.731
VDBG_05241 Verticillium albo atrum VDBG_05241 N 0.846
VDAG_08863 Verticillium dahliae VDAG_08863 N 0.846
ZC3H15 Vicugna pacos ENSVPAG00000006980 N 0.731
AAH77826 Xenopus laevis AAH77826 N 0.731
BAD89267 Xenopus laevis BAD89267 N 0.731
Q6DD06 Xenopus laevis Q6DD06 N 0.731
GRMZM2G032258 Zea mays GRMZM2G032258 N 0.731
ZYRO0C15598g Zygosaccharomyces rouxii ZYRO0C15598g N 0.731