LOC_Os01g45330 (Oryza sativa)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 LOC_Os01g45330 T10822_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
LOC_Os01g45330.1 CCHC ZF 604 621

Links

Other CCHC ZF family RBPs
Other Oryza sativa RBPs

75 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
DGIL_AUG5s9216g3t1 Acyrtosiphon pisum DGIL_AUG5s9216g3t1 N 0.000
Aqu1.204126 Amphimedon queenslandica Aqu1.204126 N 0.000
EuGene.0000020314 Micromonas pusilla EuGene.0000020314 N 0.000
LOC_Os10g07460 Oryza sativa LOC_Os10g07460 N 0.000
LOC_Os10g03110 Oryza sativa LOC_Os10g03110 N 0.000
LOC_Os09g29810 Oryza sativa LOC_Os09g29810 N 0.000
LOC_Os09g21840 Oryza sativa LOC_Os09g21840 N 0.000
LOC_Os09g16100 Oryza sativa LOC_Os09g16100 N 0.000
LOC_Os09g14500 Oryza sativa LOC_Os09g14500 N 0.000
LOC_Os08g40550 Oryza sativa LOC_Os08g40550 N 0.000
LOC_Os08g29980 Oryza sativa LOC_Os08g29980 N 0.000
LOC_Os08g28530 Oryza sativa LOC_Os08g28530 N 0.000
LOC_Os08g15010 Oryza sativa LOC_Os08g15010 N 0.000
LOC_Os08g03880 Oryza sativa LOC_Os08g03880 N 0.000
LOC_Os10g07578 Oryza sativa LOC_Os10g07578 N 0.000
LOC_Os10g17540 Oryza sativa LOC_Os10g17540 N 0.000
LOC_Os10g29420 Oryza sativa LOC_Os10g29420 N 0.000
LOC_Os12g40060 Oryza sativa LOC_Os12g40060 N 0.000
LOC_Os12g24290 Oryza sativa LOC_Os12g24290 N 0.000
LOC_Os12g10900 Oryza sativa LOC_Os12g10900 N 0.000
LOC_Os12g09260 Oryza sativa LOC_Os12g09260 N 0.000
LOC_Os11g45610 Oryza sativa LOC_Os11g45610 N 0.000
LOC_Os11g44190 Oryza sativa LOC_Os11g44190 N 0.000
LOC_Os11g43560 Oryza sativa LOC_Os11g43560 N 0.000
LOC_Os11g11860 Oryza sativa LOC_Os11g11860 N 0.000
LOC_Os11g10630 Oryza sativa LOC_Os11g10630 N 0.000
LOC_Os11g06960 Oryza sativa LOC_Os11g06960 N 0.000
LOC_Os10g41610 Oryza sativa LOC_Os10g41610 N 0.000
LOC_Os07g18970 Oryza sativa LOC_Os07g18970 N 0.000
LOC_Os04g24570 Oryza sativa LOC_Os04g24570 N 0.000
LOC_Os04g13350 Oryza sativa LOC_Os04g13350 N 0.000
LOC_Os04g12100 Oryza sativa LOC_Os04g12100 N 0.000
LOC_Os04g12000 Oryza sativa LOC_Os04g12000 N 0.000
LOC_Os04g07580 Oryza sativa LOC_Os04g07580 N 0.000
LOC_Os03g30810 Oryza sativa LOC_Os03g30810 N 0.000
LOC_Os02g38000 Oryza sativa LOC_Os02g38000 N 0.000
LOC_Os02g20200 Oryza sativa LOC_Os02g20200 N 0.000
LOC_Os02g17720 Oryza sativa LOC_Os02g17720 N 0.000
LOC_Os02g06810 Oryza sativa LOC_Os02g06810 N 0.000
LOC_Os01g70540 Oryza sativa LOC_Os01g70540 N 0.000
LOC_Os01g50090 Oryza sativa LOC_Os01g50090 N 0.000
LOC_Os01g16850 Oryza sativa LOC_Os01g16850 N 0.000
LOC_Os04g18244 Oryza sativa LOC_Os04g18244 N 0.000
LOC_Os04g22050 Oryza sativa LOC_Os04g22050 N 0.000
LOC_Os07g18730 Oryza sativa LOC_Os07g18730 N 0.000
LOC_Os07g17260 Oryza sativa LOC_Os07g17260 N 0.000
LOC_Os07g05600 Oryza sativa LOC_Os07g05600 N 0.000
LOC_Os06g41690 Oryza sativa LOC_Os06g41690 N 0.000
LOC_Os06g28330 Oryza sativa LOC_Os06g28330 N 0.000
LOC_Os06g06802 Oryza sativa LOC_Os06g06802 N 0.000
LOC_Os06g05680 Oryza sativa LOC_Os06g05680 N 0.000
LOC_Os05g48170 Oryza sativa LOC_Os05g48170 N 0.000
LOC_Os05g03600 Oryza sativa LOC_Os05g03600 N 0.000
LOC_Os04g49290 Oryza sativa LOC_Os04g49290 N 0.000
LOC_Os04g41520 Oryza sativa LOC_Os04g41520 N 0.000
LOC_Os04g35870 Oryza sativa LOC_Os04g35870 N 0.000
fgenesh1_pg.C_scaffold_2102000001 Phytophthora ramorum fgenesh1_pg.C_scaffold_2102000001 N 0.000
fgenesh1_pg.C_scaffold_23000077 Phytophthora ramorum fgenesh1_pg.C_scaffold_23000077 N 0.000
fgenesh1_pg.C_scaffold_2342000001 Phytophthora ramorum fgenesh1_pg.C_scaffold_2342000001 N 0.000
fgenesh1_pg.C_scaffold_2352000001 Phytophthora ramorum fgenesh1_pg.C_scaffold_2352000001 N 0.000
fgenesh1_pg.C_scaffold_315000002 Phytophthora ramorum fgenesh1_pg.C_scaffold_315000002 N 0.000
fgenesh1_pg.C_scaffold_6000001 Phytophthora ramorum fgenesh1_pg.C_scaffold_6000001 N 0.000
fgenesh1_pg.C_scaffold_2072000002 Phytophthora ramorum fgenesh1_pg.C_scaffold_2072000002 N 0.000
fgenesh1_pg.C_scaffold_20000020 Phytophthora ramorum fgenesh1_pg.C_scaffold_20000020 N 0.000
fgenesh1_pg.C_scaffold_17000001 Phytophthora ramorum fgenesh1_pg.C_scaffold_17000001 N 0.000
fgenesh1_pg.C_scaffold_1590000001 Phytophthora ramorum fgenesh1_pg.C_scaffold_1590000001 N 0.000
fgenesh1_pg.C_scaffold_135000007 Phytophthora ramorum fgenesh1_pg.C_scaffold_135000007 N 0.000
fgenesh1_pg.C_scaffold_1347000001 Phytophthora ramorum fgenesh1_pg.C_scaffold_1347000001 N 0.000
fgenesh1_pg.C_scaffold_1242000001 Phytophthora ramorum fgenesh1_pg.C_scaffold_1242000001 N 0.000
fgenesh1_pg.C_scaffold_911000002 Phytophthora ramorum fgenesh1_pg.C_scaffold_911000002 N 0.000
PGTG_05870 Puccinia graminis PGTG_05870 N 0.000