LOC_Os12g02010 (Oryza sativa)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 LOC_Os12g02010 T12470_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
LOC_Os12g02010.1 CCHC ZF 370 387

Links

Other CCHC ZF family RBPs
Other Oryza sativa RBPs

10 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
GR-RBP3 Arabidopsis thaliana AT5G61030-TAIR-G N 0.000
PK15111.1 Cannabis sativa PK15111.1 N 0.000
Cucsa.198260 Cucumis sativus Cucsa.198260 N 0.000
Cucsa.113230 Cucumis sativus Cucsa.113230 N 0.000
Glyma17g08630.1 Glycine max Glyma17g08630.1 N 0.000
Glyma05g00400.1 Glycine max Glyma05g00400.1 N 0.000
MDP0000635271 Malus x domestica MDP0000635271 N 0.000
MDP0000302917 Malus x domestica MDP0000302917 N 0.000
MDP0000255642 Malus x domestica MDP0000255642 N 0.000
cassava29352.valid.m1 Manihot esculenta cassava29352.valid.m1 N 0.000
cassava43399.valid.m1 Manihot esculenta cassava43399.valid.m1 N 0.000
cassava29351.valid.m1 Manihot esculenta cassava29351.valid.m1 N 0.000
mgf016144m Mimulus guttatus mgf016144m N 0.000
mgf014059m Mimulus guttatus mgf014059m N 0.000
mgf012875m Mimulus guttatus mgf012875m N 0.000
mgf007732m Mimulus guttatus mgf007732m N 0.000
PDK_20s1328241g004 Phoenix dactylifera PDK_20s1328241g004 N 0.000
B9I2R7_POPTR Populus trichocarpa POPTR_0012s05870 N 0.000
ppa010113m Prunus persica ppa010113m N 0.000
30138.m003973 Ricinus communis 30138.m003973 N 0.000
GSVIVG00007865001 Vitis vinifera GSVIVG00007865001 N 0.000