CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
Home
Tools
Download cart
Bulk downloads
Database stats
Contact us
Help
How to cite
LARP4
(
Ornithorhynchus anatinus
)
La
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF05383 (La)
IPR006630
ENSOANG00000004373
T22803_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSOANP00000006928
La
124
181
LKKQLEFCFSRENLSKDLYLISQMDSDQFVPIWTVANMEEIKKLTTDLDLILEVLKSS
ENSOANP00000006929
La
9
66
LKKQLEFCFSRENLSKDLYLISQMDSDQFVPIWTVANMEEIKKLTTDLDLILEVLKSS
Links
Other
La
family RBPs
Other
Ornithorhynchus anatinus
RBPs
89 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
XM_002893897.1
Arabidopsis lyrata
Al_scaffold_0001_3801
N
0.000
PTB3
Arabidopsis thaliana
AT1G43190-TAIR-G
N
0.000
BRADI2G24150
Brachypodium distachyon
BRADI2G24150
N
0.000
PK14373.1
Cannabis sativa
PK14373.1
N
0.000
Cucsa.365870
Cucumis sativus
Cucsa.365870
N
0.000
Glyma02g08870.1
Glycine max
Glyma02g08870.1
N
0.000
Glyma10g36770.1
Glycine max
Glyma10g36770.1
N
0.000
Glyma20g30820.1
Glycine max
Glyma20g30820.1
N
0.000
chr5.CM0052.230.nd
Lotus japonicus
chr5.CM0052.230.nd
N
0.000
cassava19040.valid.m1
Manihot esculenta
cassava19040.valid.m1
N
0.000
cassava19039.valid.m1
Manihot esculenta
cassava19039.valid.m1
N
0.000
cassava19038.valid.m1
Manihot esculenta
cassava19038.valid.m1
N
0.000
cassava19037.valid.m1
Manihot esculenta
cassava19037.valid.m1
N
0.000
cassava12743.valid.m1
Manihot esculenta
cassava12743.valid.m1
N
0.000
Medtr1g124970
Medicago truncatula
Medtr1g124970
N
0.000
mgf010164m
Mimulus guttatus
mgf010164m
N
0.000
LOC_Os05g36120
Oryza sativa
LOC_Os05g36120
N
0.000
LOC_Os01g64770
Oryza sativa
LOC_Os01g64770
N
0.000
PDK_20s1358001g002
Phoenix dactylifera
PDK_20s1358001g002
N
0.000
B9H7U5_POPTR
Populus trichocarpa
POPTR_0005s21660
N
0.000
B9GT89_POPTR
Populus trichocarpa
POPTR_0002s06660
N
0.000
ppa005775m
Prunus persica
ppa005775m
N
0.000
29863.m001059
Ricinus communis
29863.m001059
N
0.000
SB09G021560
Sorghum bicolor
Sb09g021560
N
0.000
GSVIVG00034558001
Vitis vinifera
GSVIVG00034558001
N
0.000
GRMZM2G070113
Zea mays
GRMZM2G070113
N
0.000
GRMZM2G052926
Zea mays
GRMZM2G052926
N
0.000