estExt_fgenesh1_pg.C_20906 (Cryphonectria parasitica)
PUF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00806 (PUF) IPR001313 estExt_fgenesh1_pg.C_20906 T25082_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
estExt_fgenesh1_pg.C_20906 PUF 516 548
estExt_fgenesh1_pg.C_20906 PUF 551 582
estExt_fgenesh1_pg.C_20906 PUF 591 622
estExt_fgenesh1_pg.C_20906 PUF 624 658
estExt_fgenesh1_pg.C_20906 PUF 661 694
estExt_fgenesh1_pg.C_20906 PUF 696 728
estExt_fgenesh1_pg.C_20906 PUF 732 766
estExt_fgenesh1_pg.C_20906 PUF 773 804

Links

Other PUF family RBPs
Other Cryphonectria parasitica RBPs

19 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
BC1G_04124 Botrytis cinerea BC1G_04124 N 0.749
CHGG_07853 Chaetomium globosum CHGG_07853 N 0.782
GLRG_08647 Colletotrichum graminicola GLRG_08647 N 0.784
FGSG_00841 Fusarium graminearum FGSG_00841 N 0.755
FOXG_00799 Fusarium oxysporum FOXG_00799 N 0.779
FVEG_00716 Fusarium verticillioides FVEG_00716 N 0.770
MGG_14563 Magnaporthe oryzae MGG_14563 N 0.782
fgenesh1_pm.7_#_395 Myceliophthora thermophila fgenesh1_pm.7_#_395 N 0.785
estExt_Genewise1Plus.C_sca_1_chr1_3_00914 Nectria haematococca estExt_Genewise1Plus.C_sca_1_chr1_3_00914 N 0.775
NCU11928 Neurospora crassa NCU11928 N 0.753
e_gw1.11.367.1 Neurospora discreta e_gw1.11.367.1 N 0.753
estExt_Genewise1.C_130193 Neurospora tetrasperma estExt_Genewise1.C_130193 N 0.753
SS1G_03751 Sclerotinia sclerotiorum SS1G_03751 N 0.742
estExt_Genewise1.C_61114 Thielavia terrestris estExt_Genewise1.C_61114 N 0.774
estExt_Genewise1Plus.C_70288 Trichoderma atroviride estExt_Genewise1Plus.C_70288 N 0.748
e_gw1.11.407.1 Trichoderma reesei e_gw1.11.407.1 N 0.714
gw1.8.62.1 Trichoderma virens gw1.8.62.1 N 0.758
VDBG_05326 Verticillium albo atrum VDBG_05326 N 0.770
VDAG_06977 Verticillium dahliae VDAG_06977 N 0.770