fgenesh1_pm.7_#_395 (Myceliophthora thermophila)
PUF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00806 (PUF) IPR001313 fgenesh1_pm.7_#_395 T24852_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
fgenesh1_pm.7_#_395 PUF 593 624
fgenesh1_pm.7_#_395 PUF 627 658
fgenesh1_pm.7_#_395 PUF 665 698
fgenesh1_pm.7_#_395 PUF 700 734
fgenesh1_pm.7_#_395 PUF 737 766
fgenesh1_pm.7_#_395 PUF 773 806
fgenesh1_pm.7_#_395 PUF 808 842
fgenesh1_pm.7_#_395 PUF 849 880

Links

Other PUF family RBPs
Other Myceliophthora thermophila RBPs

20 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
estExt_Genewise1.C_61114 Thielavia terrestris estExt_Genewise1.C_61114 N 0.928
CHGG_07853 Chaetomium globosum CHGG_07853 N 0.925
GLRG_08647 Colletotrichum graminicola GLRG_08647 N 0.790
e_gw1.11.367.1 Neurospora discreta e_gw1.11.367.1 N 0.789
NCU11928 Neurospora crassa NCU11928 N 0.789
estExt_Genewise1.C_130193 Neurospora tetrasperma estExt_Genewise1.C_130193 N 0.789
estExt_fgenesh1_pg.C_20906 Cryphonectria parasitica estExt_fgenesh1_pg.C_20906 N 0.785
MGG_14563 Magnaporthe oryzae MGG_14563 N 0.776
VDBG_05326 Verticillium albo atrum VDBG_05326 N 0.774
VDAG_06977 Verticillium dahliae VDAG_06977 N 0.774
estExt_Genewise1Plus.C_70288 Trichoderma atroviride estExt_Genewise1Plus.C_70288 N 0.768
gw1.8.62.1 Trichoderma virens gw1.8.62.1 N 0.759
estExt_Genewise1Plus.C_sca_1_chr1_3_00914 Nectria haematococca estExt_Genewise1Plus.C_sca_1_chr1_3_00914 N 0.755
SS1G_03751 Sclerotinia sclerotiorum SS1G_03751 N 0.749
FOXG_00799 Fusarium oxysporum FOXG_00799 N 0.747
FVEG_00716 Fusarium verticillioides FVEG_00716 N 0.745
BC1G_04124 Botrytis cinerea BC1G_04124 N 0.745
FGSG_00841 Fusarium graminearum FGSG_00841 N 0.738
Pa_3_7810 Podospora anserina Pa_3_7810 N 0.714
e_gw1.11.407.1 Trichoderma reesei e_gw1.11.407.1 N 0.712