SS1G_03751 (Sclerotinia sclerotiorum)
PUF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00806 (PUF) IPR001313 SS1G_03751 T23940_0.6 Broad (2011-Oct-27)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
SS1T_03751 PUF 663 696
SS1T_03751 PUF 699 732
SS1T_03751 PUF 739 770
SS1T_03751 PUF 776 806
SS1T_03751 PUF 809 838
SS1T_03751 PUF 844 878
SS1T_03751 PUF 880 914
SS1T_03751 PUF 921 952

Links

Other PUF family RBPs
Other Sclerotinia sclerotiorum RBPs

26 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
BC1G_04124 Botrytis cinerea BC1G_04124 N 0.974
GLRG_08647 Colletotrichum graminicola GLRG_08647 N 0.796
VDBG_05326 Verticillium albo atrum VDBG_05326 N 0.792
VDAG_06977 Verticillium dahliae VDAG_06977 N 0.792
estExt_Genewise1Plus.C_sca_1_chr1_3_00914 Nectria haematococca estExt_Genewise1Plus.C_sca_1_chr1_3_00914 N 0.778
FOXG_00799 Fusarium oxysporum FOXG_00799 N 0.769
FGSG_00841 Fusarium graminearum FGSG_00841 N 0.769
FVEG_00716 Fusarium verticillioides FVEG_00716 N 0.767
gw1.8.62.1 Trichoderma virens gw1.8.62.1 N 0.757
estExt_Genewise1.C_61114 Thielavia terrestris estExt_Genewise1.C_61114 N 0.757
CHGG_07853 Chaetomium globosum CHGG_07853 N 0.751
fgenesh1_pm.7_#_395 Myceliophthora thermophila fgenesh1_pm.7_#_395 N 0.749
estExt_fgenesh1_pg.C_20906 Cryphonectria parasitica estExt_fgenesh1_pg.C_20906 N 0.742
MGG_14563 Magnaporthe oryzae MGG_14563 N 0.736
estExt_Genewise1Plus.C_70288 Trichoderma atroviride estExt_Genewise1Plus.C_70288 N 0.732
estExt_Genewise1.C_130193 Neurospora tetrasperma estExt_Genewise1.C_130193 N 0.731
e_gw1.11.367.1 Neurospora discreta e_gw1.11.367.1 N 0.731
NCU11928 Neurospora crassa NCU11928 N 0.731
AO090005000845 Aspergillus oryzae CADAORAG00002798 N 0.714
AFLA_080970 Aspergillus flavus CADAFLAG00000878 N 0.714
e_gw1.11.407.1 Trichoderma reesei e_gw1.11.407.1 N 0.707
An01g05700 Aspergillus niger CADANGAG00000562 N 0.705
CIMG_11716 Coccidioides immitis CIMG_11716 N 0.703
CPSG_00792 Coccidioides posadasii CPSG_00792 N 0.703
NFIA_022100 Neosartorya fischeri CADNFIAG00001651 N 0.702
BDBG_05830 Blastomyces dermatitidis BDBG_05830 N 0.702