BC1G_04124 (Botrytis cinerea)
PUF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00806 (PUF) IPR001313 BC1G_04124 T23754_0.6 Broad (2011-Oct-27)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
BC1T_04124 PUF 666 699
BC1T_04124 PUF 702 735
BC1T_04124 PUF 742 773
BC1T_04124 PUF 777 809
BC1T_04124 PUF 812 841
BC1T_04124 PUF 847 881
BC1T_04124 PUF 883 917
BC1T_04124 PUF 924 955

Links

Other PUF family RBPs
Other Botrytis cinerea RBPs

22 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
SS1G_03751 Sclerotinia sclerotiorum SS1G_03751 N 0.974
VDAG_06977 Verticillium dahliae VDAG_06977 N 0.796
VDBG_05326 Verticillium albo atrum VDBG_05326 N 0.796
GLRG_08647 Colletotrichum graminicola GLRG_08647 N 0.786
estExt_Genewise1Plus.C_sca_1_chr1_3_00914 Nectria haematococca estExt_Genewise1Plus.C_sca_1_chr1_3_00914 N 0.772
FOXG_00799 Fusarium oxysporum FOXG_00799 N 0.769
FVEG_00716 Fusarium verticillioides FVEG_00716 N 0.767
FGSG_00841 Fusarium graminearum FGSG_00841 N 0.762
estExt_fgenesh1_pg.C_20906 Cryphonectria parasitica estExt_fgenesh1_pg.C_20906 N 0.749
estExt_Genewise1.C_61114 Thielavia terrestris estExt_Genewise1.C_61114 N 0.749
gw1.8.62.1 Trichoderma virens gw1.8.62.1 N 0.747
CHGG_07853 Chaetomium globosum CHGG_07853 N 0.747
fgenesh1_pm.7_#_395 Myceliophthora thermophila fgenesh1_pm.7_#_395 N 0.745
MGG_14563 Magnaporthe oryzae MGG_14563 N 0.736
estExt_Genewise1Plus.C_70288 Trichoderma atroviride estExt_Genewise1Plus.C_70288 N 0.728
NCU11928 Neurospora crassa NCU11928 N 0.723
estExt_Genewise1.C_130193 Neurospora tetrasperma estExt_Genewise1.C_130193 N 0.723
e_gw1.11.367.1 Neurospora discreta e_gw1.11.367.1 N 0.723
e_gw1.11.407.1 Trichoderma reesei e_gw1.11.407.1 N 0.711
AO090005000845 Aspergillus oryzae CADAORAG00002798 N 0.710
AFLA_080970 Aspergillus flavus CADAFLAG00000878 N 0.710
An01g05700 Aspergillus niger CADANGAG00000562 N 0.709