VDBG_05326 (Verticillium albo atrum)
PUF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00806 (PUF) IPR001313 VDBG_05326 T23969_0.6 Broad (2011-Oct-27)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
VDBG_05326T0 PUF 765 797
VDBG_05326T0 PUF 800 831
VDBG_05326T0 PUF 839 871
VDBG_05326T0 PUF 875 907
VDBG_05326T0 PUF 910 939
VDBG_05326T0 PUF 945 979
VDBG_05326T0 PUF 981 1014
VDBG_05326T0 PUF 1022 1053

Links

Other PUF family RBPs
Other Verticillium albo atrum RBPs

19 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
VDAG_06977 Verticillium dahliae VDAG_06977 N 1.000
GLRG_08647 Colletotrichum graminicola GLRG_08647 N 0.875
FOXG_00799 Fusarium oxysporum FOXG_00799 N 0.816
estExt_Genewise1Plus.C_sca_1_chr1_3_00914 Nectria haematococca estExt_Genewise1Plus.C_sca_1_chr1_3_00914 N 0.816
FVEG_00716 Fusarium verticillioides FVEG_00716 N 0.811
FGSG_00841 Fusarium graminearum FGSG_00841 N 0.810
BC1G_04124 Botrytis cinerea BC1G_04124 N 0.796
gw1.8.62.1 Trichoderma virens gw1.8.62.1 N 0.796
SS1G_03751 Sclerotinia sclerotiorum SS1G_03751 N 0.792
MGG_14563 Magnaporthe oryzae MGG_14563 N 0.787
CHGG_07853 Chaetomium globosum CHGG_07853 N 0.784
estExt_Genewise1.C_61114 Thielavia terrestris estExt_Genewise1.C_61114 N 0.782
estExt_Genewise1Plus.C_70288 Trichoderma atroviride estExt_Genewise1Plus.C_70288 N 0.776
fgenesh1_pm.7_#_395 Myceliophthora thermophila fgenesh1_pm.7_#_395 N 0.774
estExt_fgenesh1_pg.C_20906 Cryphonectria parasitica estExt_fgenesh1_pg.C_20906 N 0.770
e_gw1.11.367.1 Neurospora discreta e_gw1.11.367.1 N 0.732
e_gw1.11.407.1 Trichoderma reesei e_gw1.11.407.1 N 0.732
estExt_Genewise1.C_130193 Neurospora tetrasperma estExt_Genewise1.C_130193 N 0.732
NCU11928 Neurospora crassa NCU11928 N 0.732