estExt_Genewise1Plus.C_70288 (Trichoderma atroviride)
PUF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00806 (PUF) IPR001313 estExt_Genewise1Plus.C_70288 T24819_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
estExt_Genewise1Plus.C_70288 PUF 323 356
estExt_Genewise1Plus.C_70288 PUF 359 390
estExt_Genewise1Plus.C_70288 PUF 396 430
estExt_Genewise1Plus.C_70288 PUF 432 466
estExt_Genewise1Plus.C_70288 PUF 471 501
estExt_Genewise1Plus.C_70288 PUF 507 540
estExt_Genewise1Plus.C_70288 PUF 543 576
estExt_Genewise1Plus.C_70288 PUF 580 614

Links

Other PUF family RBPs
Other Trichoderma atroviride RBPs

19 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
gw1.8.62.1 Trichoderma virens gw1.8.62.1 N 0.900
estExt_Genewise1Plus.C_sca_1_chr1_3_00914 Nectria haematococca estExt_Genewise1Plus.C_sca_1_chr1_3_00914 N 0.871
FOXG_00799 Fusarium oxysporum FOXG_00799 N 0.867
FVEG_00716 Fusarium verticillioides FVEG_00716 N 0.864
FGSG_00841 Fusarium graminearum FGSG_00841 N 0.828
e_gw1.11.407.1 Trichoderma reesei e_gw1.11.407.1 N 0.819
GLRG_08647 Colletotrichum graminicola GLRG_08647 N 0.794
VDBG_05326 Verticillium albo atrum VDBG_05326 N 0.776
VDAG_06977 Verticillium dahliae VDAG_06977 N 0.776
fgenesh1_pm.7_#_395 Myceliophthora thermophila fgenesh1_pm.7_#_395 N 0.768
CHGG_07853 Chaetomium globosum CHGG_07853 N 0.757
estExt_Genewise1.C_61114 Thielavia terrestris estExt_Genewise1.C_61114 N 0.754
estExt_fgenesh1_pg.C_20906 Cryphonectria parasitica estExt_fgenesh1_pg.C_20906 N 0.748
MGG_14563 Magnaporthe oryzae MGG_14563 N 0.747
estExt_Genewise1.C_130193 Neurospora tetrasperma estExt_Genewise1.C_130193 N 0.739
e_gw1.11.367.1 Neurospora discreta e_gw1.11.367.1 N 0.739
NCU11928 Neurospora crassa NCU11928 N 0.739
SS1G_03751 Sclerotinia sclerotiorum SS1G_03751 N 0.732
BC1G_04124 Botrytis cinerea BC1G_04124 N 0.728