estExt_Genewise1Plus.C_sca_1_chr1_3_00914 (Nectria haematococca)
PUF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00806 (PUF) IPR001313 estExt_Genewise1Plus.C_sca_1_chr1_3_00914 T24822_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
estExt_Genewise1Plus.C_sca_1_chr1_3_00914 PUF 360 393
estExt_Genewise1Plus.C_sca_1_chr1_3_00914 PUF 396 427
estExt_Genewise1Plus.C_sca_1_chr1_3_00914 PUF 434 467
estExt_Genewise1Plus.C_sca_1_chr1_3_00914 PUF 473 503
estExt_Genewise1Plus.C_sca_1_chr1_3_00914 PUF 508 536
estExt_Genewise1Plus.C_sca_1_chr1_3_00914 PUF 541 575
estExt_Genewise1Plus.C_sca_1_chr1_3_00914 PUF 577 611
estExt_Genewise1Plus.C_sca_1_chr1_3_00914 PUF 618 649

Links

Other PUF family RBPs
Other Nectria haematococca RBPs

19 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
FOXG_00799 Fusarium oxysporum FOXG_00799 N 0.899
gw1.8.62.1 Trichoderma virens gw1.8.62.1 N 0.896
FVEG_00716 Fusarium verticillioides FVEG_00716 N 0.893
FGSG_00841 Fusarium graminearum FGSG_00841 N 0.891
estExt_Genewise1Plus.C_70288 Trichoderma atroviride estExt_Genewise1Plus.C_70288 N 0.871
GLRG_08647 Colletotrichum graminicola GLRG_08647 N 0.848
VDBG_05326 Verticillium albo atrum VDBG_05326 N 0.816
VDAG_06977 Verticillium dahliae VDAG_06977 N 0.816
e_gw1.11.407.1 Trichoderma reesei e_gw1.11.407.1 N 0.803
MGG_14563 Magnaporthe oryzae MGG_14563 N 0.787
SS1G_03751 Sclerotinia sclerotiorum SS1G_03751 N 0.778
estExt_fgenesh1_pg.C_20906 Cryphonectria parasitica estExt_fgenesh1_pg.C_20906 N 0.775
BC1G_04124 Botrytis cinerea BC1G_04124 N 0.772
CHGG_07853 Chaetomium globosum CHGG_07853 N 0.758
estExt_Genewise1.C_61114 Thielavia terrestris estExt_Genewise1.C_61114 N 0.758
fgenesh1_pm.7_#_395 Myceliophthora thermophila fgenesh1_pm.7_#_395 N 0.755
e_gw1.11.367.1 Neurospora discreta e_gw1.11.367.1 N 0.749
NCU11928 Neurospora crassa NCU11928 N 0.749
estExt_Genewise1.C_130193 Neurospora tetrasperma estExt_Genewise1.C_130193 N 0.749