CHGG_05573 (Chaetomium globosum)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 CHGG_05573 T28606_0.6 Broad (2011-Oct-27)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
CHGT_05573 RRM 65 100
CHGT_05573 RRM 121 191
CHGT_05573 RRM 247 311

Links

Other RRM family RBPs
Other Chaetomium globosum RBPs

40 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
fgenesh1_pm.00083_#_553 Aspergillus carbonarius fgenesh1_pm.00083_#_553 N 0.751
ACLA_023580 Aspergillus clavatus CADACLAG00002187 N 0.732
AFLA_067600 Aspergillus flavus CADAFLAG00008184 N 0.732
ANIA_10164 Aspergillus nidulans CADANIAG00001543 N 0.755
An08g04280 Aspergillus niger CADANGAG00006749 N 0.756
AO090001000353 Aspergillus oryzae CADAORAG00000317 N 0.732
ATEG_00398 Aspergillus terreus CADATEAG00007828 N 0.751
CIMG_09023 Coccidioides immitis CIMG_09023 N 0.784
CPSG_01385 Coccidioides posadasii CPSG_01385 N 0.791
GLRG_08449 Colletotrichum graminicola GLRG_08449 N 0.768
estExt_Genewise1Plus.C_11264 Cryphonectria parasitica estExt_Genewise1Plus.C_11264 N 0.786
FGSG_05417 Fusarium graminearum FGSG_05417 N 0.754
FOXG_09482 Fusarium oxysporum FOXG_09482 N 0.778
FVEG_07111 Fusarium verticillioides FVEG_07111 N 0.778
MCYG_03737 Microsporum canis MCYG_03737 N 0.764
MGYG_03339 Microsporum gypseum MGYG_03339 N 0.755
estExt_fgenesh1_kg.C_40363 Myceliophthora thermophila estExt_fgenesh1_kg.C_40363 N 0.801
estExt_Genewise1.C_140496 Mycosphaerella fijiensis estExt_Genewise1.C_140496 N 0.731
e_gw1.2.1591.1 Mycosphaerella graminicola e_gw1.2.1591.1 N 0.740
estExt_Genewise1Plus.C_sca_10_chr8_2_00705 Nectria haematococca estExt_Genewise1Plus.C_sca_10_chr8_2_00705 N 0.787
NFIA_013530 Neosartorya fischeri CADNFIAG00000800 N 0.745
NCU07874 Neurospora crassa NCU07874 N 0.791
estExt_fgenesh3_kg.C_200038 Neurospora discreta estExt_fgenesh3_kg.C_200038 N 0.741
PABG_03400 Paracoccidioides brasiliensis PABG_03400 N 0.782
Pc12g15120 Penicillium chrysogenum Pc12g15120 N 0.731
PMAA_098010 Penicillium marneffei PMAA_098010 N 0.750
EAT81850.2 Phaeosphaeria nodorum EAT81850.2 N 0.704
Pa_7_10990 Podospora anserina Pa_7_10990 N 0.791
SS1G_03339 Sclerotinia sclerotiorum SS1G_03339 N 0.772
SNOG_10456 Stagonospora nodorum SNOG_10456 N 0.704
estExt_Genewise1Plus.C_32201 Thielavia terrestris estExt_Genewise1Plus.C_32201 N 0.811
estExt_fgenesh1_pg.C_90049 Trichoderma atroviride estExt_fgenesh1_pg.C_90049 N 0.768
estExt_GeneWisePlus.C_11433 Trichoderma reesei estExt_GeneWisePlus.C_11433 N 0.768
e_gw1.32.97.1 Trichoderma virens e_gw1.32.97.1 N 0.783
TEQG_03955 Trichophyton equinum TEQG_03955 N 0.769
TERG_05178 Trichophyton rubrum TERG_05178 N 0.769
GSTUMT00010135001 Tuber melanosporum GSTUMT00010135001 N 0.762
UREG_03354 Uncinocarpus reesii UREG_03354 N 0.780
VDBG_07004 Verticillium albo atrum VDBG_07004 N 0.725
VDAG_06648 Verticillium dahliae VDAG_06648 N 0.817