PK18808.1 (Cannabis sativa)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 PK18808.1 T31727_0.6 Cannabis sativa genome (2012-Feb-20)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
PK18808.1 RRM 127 196
PK18808.1 RRM 218 286

Links

Other RRM family RBPs
Other Cannabis sativa RBPs

19 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
XM_002868098.1 Arabidopsis lyrata fgenesh2_kg.7__2690__AT4G16280.3 N 0.793
FCA Arabidopsis thaliana AT4G16280-TAIR-G N 0.800
Cucsa.247020 Cucumis sativus Cucsa.247020 N 0.856
Glyma17g03960.1 Glycine max Glyma17g03960.1 N 0.879
Glyma07g36630.1 Glycine max Glyma07g36630.1 N 0.886
chr4.CM0333.80.nd Lotus japonicus chr4.CM0333.80.nd N 0.836
cassava42169.valid.m1 Manihot esculenta cassava42169.valid.m1 N 0.871
cassava42168.valid.m1 Manihot esculenta cassava42168.valid.m1 N 0.871
Medtr8g136920 Medicago truncatula Medtr8g136920 N 0.850
BGIOSIBCE029031 Oryza indica BGIOSIBCE029031 N 0.743
FCA Oryza sativa LOC_Os09g03610 N 0.743
e_gw1.158.95.1 Physcomitrella patens e_gw1.158.95.1 N 0.736
gw1.47.198.1 Physcomitrella patens gw1.47.198.1 N 0.727
ppa002369m Prunus persica ppa002369m N 0.899
29889.m003323 Ricinus communis 29889.m003323 N 0.864
Sb02g014690 Sorghum bicolor Sb02g014690 N 0.755
GSVIVG00034966001 Vitis vinifera GSVIVG00034966001 N 0.857
GSVIVG00028149001 Vitis vinifera GSVIVG00028149001 N 0.712
GRMZM2G065276 Zea mays GRMZM2G065276 N 0.750