CID13 (Arabidopsis thaliana)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 AT5G24440-TAIR-G T32824_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
AT5G24440.1-P RRM 139 206
AT5G24440.1-P RRM 236 304

Links

Other RRM family RBPs
Other Arabidopsis thaliana RBPs

40 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
XM_002872481.1 Arabidopsis lyrata fgenesh2_kg.6__3042__AT4G10610.1 N 0.701
XM_002877626.1 Arabidopsis lyrata fgenesh2_kg.5__1290__AT3G49390.2 N 0.701
XM_002874153.1 Arabidopsis lyrata fgenesh1_pm.C_scaffold_6001957 N 0.956
XM_002893696.1 Arabidopsis lyrata fgenesh2_kg.1__3419__AT1G32790.2 N 0.723
CID11 Arabidopsis thaliana AT1G32790-TAIR-G N 0.723
CID10 Arabidopsis thaliana AT3G49390-TAIR-G N 0.701
ATRBP37 Arabidopsis thaliana AT4G10610-TAIR-G N 0.701
BRADI3G13740 Brachypodium distachyon BRADI3G13740 N 0.701
PK04894.1 Cannabis sativa PK04894.1 N 0.730
PK12463.1 Cannabis sativa PK12463.1 N 0.730
Cucsa.273320 Cucumis sativus Cucsa.273320 N 0.715
Glyma06g14050.1 Glycine max Glyma06g14050.1 N 0.737
Glyma06g14030.1 Glycine max Glyma06g14030.1 N 0.723
Glyma04g40760.1 Glycine max Glyma04g40760.1 N 0.708
Glyma04g40750.1 Glycine max Glyma04g40750.1 N 0.730
MDP0000233630 Malus x domestica MDP0000233630 N 0.737
cassava43127.valid.m1 Manihot esculenta cassava43127.valid.m1 N 0.737
cassava41364.m1 Manihot esculenta cassava41364.m1 N 0.737
cassava41363.m1 Manihot esculenta cassava41363.m1 N 0.737
cassava38065.valid.m1 Manihot esculenta cassava38065.valid.m1 N 0.730
cassava38064.valid.m1 Manihot esculenta cassava38064.valid.m1 N 0.730
cassava38063.valid.m1 Manihot esculenta cassava38063.valid.m1 N 0.730
cassava37979.valid.m1 Manihot esculenta cassava37979.valid.m1 N 0.737
cassava37978.valid.m1 Manihot esculenta cassava37978.valid.m1 N 0.737
Medtr3g122880 Medicago truncatula Medtr3g122880 N 0.715
Medtr3g122920 Medicago truncatula Medtr3g122920 N 0.723
mgf013366m Mimulus guttatus mgf013366m N 0.708
mgf012896m Mimulus guttatus mgf012896m N 0.723
BGIOSIBCE026288 Oryza indica BGIOSIBCE026288 N 0.708
LOC_Os08g02330 Oryza sativa LOC_Os08g02330 N 0.708
ppa006808m Prunus persica ppa006808m N 0.745
ppa009298m Prunus persica ppa009298m N 0.708
29485.m000140 Ricinus communis 29485.m000140 N 0.730
30068.m002593 Ricinus communis 30068.m002593 N 0.723
SB07G001560 Sorghum bicolor Sb07g001560 N 0.723
GSVIVG00019674001 Vitis vinifera GSVIVG00019674001 N 0.715
GSVIVG00038633001 Vitis vinifera GSVIVG00038633001 N 0.715
GSVIVG00001961001 Vitis vinifera GSVIVG00001961001 N 0.701
GRMZM2G069102 Zea mays GRMZM2G069102 N 0.723
GRMZM2G173428 Zea mays GRMZM2G173428 N 0.723