CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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ATEG_02173
(
Aspergillus terreus
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
CADATEAG00000030
T33723_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
CADATEAP00000030
RRM
251
316
LFVTGVEDDLPEHALRTFFTQFGQLRSLVCSHRAHSAFVNYASRASAEAAAQHCQGKAVIQGCPLR
Links
Other
RRM
family RBPs
Other
Aspergillus terreus
RBPs
29 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
AB02569.1
Alternaria brassicicola
AB02569.1
N
0.712
ARB_05996
Arthroderma benhamiae
ARB_05996
N
0.803
fgenesh1_pg.00795_#_104
Aspergillus carbonarius
fgenesh1_pg.00795_#_104
N
0.864
ACLA_054770
Aspergillus clavatus
CADACLAG00005233
N
0.894
AFLA_041240
Aspergillus flavus
CADAFLAG00005451
N
0.879
AFUA_4G03640
Aspergillus fumigatus
CADAFUAG00001443
N
0.864
ANIA_07145
Aspergillus nidulans
CADANIAG00000312
N
0.879
An14g01580
Aspergillus niger
CADANGAG00011093
N
0.864
AO090011000290
Aspergillus oryzae
CADAORAG00005058
N
0.879
BDBG_08699
Blastomyces dermatitidis
BDBG_08699
N
0.833
CIMG_08445
Coccidioides immitis
CIMG_08445
N
0.788
CPSG_08272
Coccidioides posadasii
CPSG_08272
N
0.788
estExt_Genewise1.C_50279
Cochliobolus heterostrophus C5
estExt_Genewise1.C_50279
N
0.727
HCAG_07565
Histoplasma capsulatum
HCAG_07565
N
0.833
MCYG_02745
Microsporum canis
MCYG_02745
N
0.818
MGYG_08476
Microsporum gypseum
MGYG_08476
N
0.818
e_gw1.8.691.1
Mycosphaerella fijiensis
e_gw1.8.691.1
N
0.742
NFIA_029780
Neosartorya fischeri
CADNFIAG00002898
N
0.864
PABG_03629
Paracoccidioides brasiliensis
PABG_03629
N
0.818
Pc12g14830
Penicillium chrysogenum
Pc12g14830
N
0.818
PMAA_006050
Penicillium marneffei
PMAA_006050
N
0.833
EAT84720.1
Phaeosphaeria nodorum
EAT84720.1
N
0.712
PTRG_08575
Pyrenophora tritici repentis
PTRG_08575
N
0.727
SNOG_08444
Stagonospora nodorum
SNOG_08444
N
0.712
TEQG_04110
Trichophyton equinum
TEQG_04110
N
0.803
TERG_05432
Trichophyton rubrum
TERG_05432
N
0.803
TESG_01774
Trichophyton tonsurans
TESG_01774
N
0.803
TRV_06346
Trichophyton verrucosum
TRV_06346
N
0.803
UREG_02520
Uncinocarpus reesii
UREG_02520
N
0.803