An14g01580 (Aspergillus niger)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 CADANGAG00011093 T33574_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
CADANGAP00010877 RRM 245 310

Links

Other RRM family RBPs
Other Aspergillus niger RBPs

27 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AFLA_041240 Aspergillus flavus CADAFLAG00005451 N 0.924
AO090011000290 Aspergillus oryzae CADAORAG00005058 N 0.924
AFUA_4G03640 Aspergillus fumigatus CADAFUAG00001443 N 0.909
fgenesh1_pg.00795_#_104 Aspergillus carbonarius fgenesh1_pg.00795_#_104 N 0.909
ACLA_054770 Aspergillus clavatus CADACLAG00005233 N 0.909
NFIA_029780 Neosartorya fischeri CADNFIAG00002898 N 0.909
ATEG_02173 Aspergillus terreus CADATEAG00000030 N 0.864
PMAA_006050 Penicillium marneffei PMAA_006050 N 0.818
ANIA_07145 Aspergillus nidulans CADANIAG00000312 N 0.818
BDBG_08699 Blastomyces dermatitidis BDBG_08699 N 0.818
TESG_01774 Trichophyton tonsurans TESG_01774 N 0.803
TEQG_04110 Trichophyton equinum TEQG_04110 N 0.803
HCAG_07565 Histoplasma capsulatum HCAG_07565 N 0.788
UREG_02520 Uncinocarpus reesii UREG_02520 N 0.788
PABG_03629 Paracoccidioides brasiliensis PABG_03629 N 0.773
TERG_05432 Trichophyton rubrum TERG_05432 N 0.773
TRV_06346 Trichophyton verrucosum TRV_06346 N 0.773
CPSG_08272 Coccidioides posadasii CPSG_08272 N 0.773
ARB_05996 Arthroderma benhamiae ARB_05996 N 0.773
CIMG_08445 Coccidioides immitis CIMG_08445 N 0.773
Pc12g14830 Penicillium chrysogenum Pc12g14830 N 0.773
MCYG_02745 Microsporum canis MCYG_02745 N 0.758
MGYG_08476 Microsporum gypseum MGYG_08476 N 0.758
e_gw1.8.691.1 Mycosphaerella fijiensis e_gw1.8.691.1 N 0.712
estExt_Genewise1Plus.C_chr_31411 Mycosphaerella graminicola estExt_Genewise1Plus.C_chr_31411 N 0.712
VDAG_01644 Verticillium dahliae VDAG_01644 N 0.712
AB02569.1 Alternaria brassicicola AB02569.1 N 0.712