CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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MCYG_02745
(
Microsporum canis
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
MCYG_02745
T29687_0.6
Broad (2011-Oct-27)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
MCYG_02745T0
RRM
239
304
LFVTGVEDDLPEHALRSFFTPFGTIRSLVCSHRSHCAFINYASRESAEAAAAKCQGIAVVQGCPLR
Links
Other
RRM
family RBPs
Other
Microsporum canis
RBPs
30 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
MGYG_08476
Microsporum gypseum
MGYG_08476
N
0.970
TRV_06346
Trichophyton verrucosum
TRV_06346
N
0.939
ARB_05996
Arthroderma benhamiae
ARB_05996
N
0.939
TERG_05432
Trichophyton rubrum
TERG_05432
N
0.939
TESG_01774
Trichophyton tonsurans
TESG_01774
N
0.924
TEQG_04110
Trichophyton equinum
TEQG_04110
N
0.924
ANIA_07145
Aspergillus nidulans
CADANIAG00000312
N
0.864
CIMG_08445
Coccidioides immitis
CIMG_08445
N
0.848
PABG_03629
Paracoccidioides brasiliensis
PABG_03629
N
0.833
HCAG_07565
Histoplasma capsulatum
HCAG_07565
N
0.833
CPSG_08272
Coccidioides posadasii
CPSG_08272
N
0.833
UREG_02520
Uncinocarpus reesii
UREG_02520
N
0.833
ATEG_02173
Aspergillus terreus
CADATEAG00000030
N
0.818
BDBG_08699
Blastomyces dermatitidis
BDBG_08699
N
0.803
ACLA_054770
Aspergillus clavatus
CADACLAG00005233
N
0.803
AFUA_4G03640
Aspergillus fumigatus
CADAFUAG00001443
N
0.773
AFLA_041240
Aspergillus flavus
CADAFLAG00005451
N
0.773
AO090011000290
Aspergillus oryzae
CADAORAG00005058
N
0.773
fgenesh1_pg.00795_#_104
Aspergillus carbonarius
fgenesh1_pg.00795_#_104
N
0.773
NFIA_029780
Neosartorya fischeri
CADNFIAG00002898
N
0.773
An14g01580
Aspergillus niger
CADANGAG00011093
N
0.758
Pc12g14830
Penicillium chrysogenum
Pc12g14830
N
0.758
estExt_Genewise1Plus.C_22014
Trichoderma atroviride
estExt_Genewise1Plus.C_22014
N
0.742
fgenesh5_pg.C_scaffold_6000164
Trichoderma reesei
fgenesh5_pg.C_scaffold_6000164
N
0.727
estExt_Genewise1Plus.C_chr_31411
Mycosphaerella graminicola
estExt_Genewise1Plus.C_chr_31411
N
0.727
e_gw1.8.691.1
Mycosphaerella fijiensis
e_gw1.8.691.1
N
0.727
fgenesh1_pg.C_scaffold_1000369
Trichoderma virens
fgenesh1_pg.C_scaffold_1000369
N
0.727
SS1G_03468
Sclerotinia sclerotiorum
SS1G_03468
N
0.712
BC1G_07906
Botrytis cinerea
BC1G_07906
N
0.712
PMAA_006050
Penicillium marneffei
PMAA_006050
N
0.712