CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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TESG_01774
(
Trichophyton tonsurans
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
TESG_01774
T31149_0.6
Broad (2011-Oct-27)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
TESG_01774T0
RRM
243
308
LFITGVEDDLPEHALRTFFTPFGTIRSLICSHRSHCAFVNFASRESAEAAAAKCQGIAVVQGCPLR
Links
Other
RRM
family RBPs
Other
Trichophyton tonsurans
RBPs
24 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
TEQG_04110
Trichophyton equinum
TEQG_04110
N
1.000
TRV_06346
Trichophyton verrucosum
TRV_06346
N
0.955
ARB_05996
Arthroderma benhamiae
ARB_05996
N
0.955
MGYG_08476
Microsporum gypseum
MGYG_08476
N
0.955
TERG_05432
Trichophyton rubrum
TERG_05432
N
0.955
MCYG_02745
Microsporum canis
MCYG_02745
N
0.924
UREG_02520
Uncinocarpus reesii
UREG_02520
N
0.864
CIMG_08445
Coccidioides immitis
CIMG_08445
N
0.848
PABG_03629
Paracoccidioides brasiliensis
PABG_03629
N
0.848
HCAG_07565
Histoplasma capsulatum
HCAG_07565
N
0.848
BDBG_08699
Blastomyces dermatitidis
BDBG_08699
N
0.848
CPSG_08272
Coccidioides posadasii
CPSG_08272
N
0.833
ACLA_054770
Aspergillus clavatus
CADACLAG00005233
N
0.818
ATEG_02173
Aspergillus terreus
CADATEAG00000030
N
0.803
An14g01580
Aspergillus niger
CADANGAG00011093
N
0.803
fgenesh1_pg.00795_#_104
Aspergillus carbonarius
fgenesh1_pg.00795_#_104
N
0.788
AFUA_4G03640
Aspergillus fumigatus
CADAFUAG00001443
N
0.788
ANIA_07145
Aspergillus nidulans
CADANIAG00000312
N
0.788
NFIA_029780
Neosartorya fischeri
CADNFIAG00002898
N
0.788
Pc12g14830
Penicillium chrysogenum
Pc12g14830
N
0.773
PMAA_006050
Penicillium marneffei
PMAA_006050
N
0.758
AO090011000290
Aspergillus oryzae
CADAORAG00005058
N
0.758
AFLA_041240
Aspergillus flavus
CADAFLAG00005451
N
0.758
estExt_Genewise1Plus.C_chr_31411
Mycosphaerella graminicola
estExt_Genewise1Plus.C_chr_31411
N
0.727