PMAA_006050 (Penicillium marneffei)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 PMAA_006050 T58251_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
PMAA_006050.t1 RRM 247 312

Links

Other RRM family RBPs
Other Penicillium marneffei RBPs

27 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ATEG_02173 Aspergillus terreus CADATEAG00000030 N 0.833
ACLA_054770 Aspergillus clavatus CADACLAG00005233 N 0.833
An14g01580 Aspergillus niger CADANGAG00011093 N 0.818
AFUA_4G03640 Aspergillus fumigatus CADAFUAG00001443 N 0.803
NFIA_029780 Neosartorya fischeri CADNFIAG00002898 N 0.803
BDBG_08699 Blastomyces dermatitidis BDBG_08699 N 0.803
Pc12g14830 Penicillium chrysogenum Pc12g14830 N 0.803
AFLA_041240 Aspergillus flavus CADAFLAG00005451 N 0.788
AO090011000290 Aspergillus oryzae CADAORAG00005058 N 0.788
UREG_02520 Uncinocarpus reesii UREG_02520 N 0.788
ANIA_07145 Aspergillus nidulans CADANIAG00000312 N 0.788
fgenesh1_pg.00795_#_104 Aspergillus carbonarius fgenesh1_pg.00795_#_104 N 0.788
PABG_03629 Paracoccidioides brasiliensis PABG_03629 N 0.773
HCAG_07565 Histoplasma capsulatum HCAG_07565 N 0.773
CIMG_08445 Coccidioides immitis CIMG_08445 N 0.758
CPSG_08272 Coccidioides posadasii CPSG_08272 N 0.758
TESG_01774 Trichophyton tonsurans TESG_01774 N 0.758
TEQG_04110 Trichophyton equinum TEQG_04110 N 0.758
MGYG_08476 Microsporum gypseum MGYG_08476 N 0.742
TRV_06346 Trichophyton verrucosum TRV_06346 N 0.727
BC1G_07906 Botrytis cinerea BC1G_07906 N 0.727
ARB_05996 Arthroderma benhamiae ARB_05996 N 0.727
SS1G_03468 Sclerotinia sclerotiorum SS1G_03468 N 0.727
TERG_05432 Trichophyton rubrum TERG_05432 N 0.727
MCYG_02745 Microsporum canis MCYG_02745 N 0.712
e_gw1.8.691.1 Mycosphaerella fijiensis e_gw1.8.691.1 N 0.712
estExt_Genewise1.C_50279 Cochliobolus heterostrophus C5 estExt_Genewise1.C_50279 N 0.712