CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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ARB_05996
(
Arthroderma benhamiae
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ARB_05996
T28190_0.6
Broad (2011-Oct-27)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ARB_05996
RRM
243
308
LFITGVEDDLPEHALRTFFTPFGTIRSLVCSHRSHCAFINFASRESAEAAAAKCQGVAVVQGCPLR
Links
Other
RRM
family RBPs
Other
Arthroderma benhamiae
RBPs
28 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
TRV_06346
Trichophyton verrucosum
TRV_06346
N
1.000
TERG_05432
Trichophyton rubrum
TERG_05432
N
1.000
MGYG_08476
Microsporum gypseum
MGYG_08476
N
0.970
TESG_01774
Trichophyton tonsurans
TESG_01774
N
0.955
TEQG_04110
Trichophyton equinum
TEQG_04110
N
0.955
MCYG_02745
Microsporum canis
MCYG_02745
N
0.939
HCAG_07565
Histoplasma capsulatum
HCAG_07565
N
0.848
UREG_02520
Uncinocarpus reesii
UREG_02520
N
0.833
ANIA_07145
Aspergillus nidulans
CADANIAG00000312
N
0.818
BDBG_08699
Blastomyces dermatitidis
BDBG_08699
N
0.818
CIMG_08445
Coccidioides immitis
CIMG_08445
N
0.818
PABG_03629
Paracoccidioides brasiliensis
PABG_03629
N
0.818
ATEG_02173
Aspergillus terreus
CADATEAG00000030
N
0.803
CPSG_08272
Coccidioides posadasii
CPSG_08272
N
0.803
AO090011000290
Aspergillus oryzae
CADAORAG00005058
N
0.788
fgenesh1_pg.00795_#_104
Aspergillus carbonarius
fgenesh1_pg.00795_#_104
N
0.788
ACLA_054770
Aspergillus clavatus
CADACLAG00005233
N
0.788
NFIA_029780
Neosartorya fischeri
CADNFIAG00002898
N
0.788
AFLA_041240
Aspergillus flavus
CADAFLAG00005451
N
0.788
AFUA_4G03640
Aspergillus fumigatus
CADAFUAG00001443
N
0.788
Pc12g14830
Penicillium chrysogenum
Pc12g14830
N
0.773
An14g01580
Aspergillus niger
CADANGAG00011093
N
0.773
estExt_Genewise1Plus.C_chr_31411
Mycosphaerella graminicola
estExt_Genewise1Plus.C_chr_31411
N
0.742
PMAA_006050
Penicillium marneffei
PMAA_006050
N
0.727
BC1G_07906
Botrytis cinerea
BC1G_07906
N
0.712
SS1G_03468
Sclerotinia sclerotiorum
SS1G_03468
N
0.712
estExt_Genewise1Plus.C_22014
Trichoderma atroviride
estExt_Genewise1Plus.C_22014
N
0.712
GSTUMT00010788001
Tuber melanosporum
GSTUMT00010788001
N
0.712