CBG05376 (Caenorhabditis briggsae)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 CBG05376 T33884_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
CBG05376 RRM 55 124

Links

Other RRM family RBPs
Other Caenorhabditis briggsae RBPs

8 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
XM_002893090.1 Arabidopsis lyrata fgenesh2_kg.1__2278__AT1G20880.1 I 0.000
AT1G22910 Arabidopsis thaliana AT1G22910-TAIR-G I 0.000
BRADI2G56676 Brachypodium distachyon BRADI2G56676 I 0.000
Cucsa.237790 Cucumis sativus Cucsa.237790 N 0.000
Glyma09g36880.1 Glycine max Glyma09g36880.1 I 0.000
Glyma12g00500.1 Glycine max Glyma12g00500.1 I 0.000
chr1.CM0150.310.nc Lotus japonicus chr1.CM0150.310.nc I 0.000
LjT28A08.70.nc Lotus japonicus LjT28A08.70.nc I 0.000
MDP0000181802 Malus x domestica MDP0000181802 N 0.000
MDP0000271231 Malus x domestica MDP0000271231 N 0.000
cassava6634.valid.m1 Manihot esculenta cassava6634.valid.m1 I 0.000
cassava6633.valid.m1 Manihot esculenta cassava6633.valid.m1 I 0.000
cassava39894.m1 Manihot esculenta cassava39894.m1 N 0.000
cassava12008.valid.m1 Manihot esculenta cassava12008.valid.m1 N 0.000
Medtr4g041420 Medicago truncatula Medtr4g041420 I 0.000
mgf002440m Mimulus guttatus mgf002440m N 0.000
BGIOSIBCE005068 Oryza indica BGIOSIBCE005068 N 0.000
BGIOSIBCE004465 Oryza indica BGIOSIBCE004465 I 0.000
LOC_Os01g72834 Oryza sativa LOC_Os01g72834 N 0.000
LOC_Os01g65550 Oryza sativa LOC_Os01g65550 I 0.000
PDK_20s1420851g001 Phoenix dactylifera PDK_20s1420851g001 I 0.000
XM_002329131.1 Populus trichocarpa POPTR_0019s09640 N 0.000
B9I875_POPTR Populus trichocarpa POPTR_0013s09120 I 0.000
ppa009564m Prunus persica ppa009564m I 0.000
30170.m013735 Ricinus communis 30170.m013735 I 0.000
e_gw1.23.82.1 Selaginella moellendorfii e_gw1.23.82.1 I 0.000
SB03G041530 Sorghum bicolor Sb03g041530 I 0.000
SB03G046430 Sorghum bicolor Sb03g046430 N 0.000
GSVIVG00037134001 Vitis vinifera GSVIVG00037134001 I 0.000
GSVIVG00013430001 Vitis vinifera GSVIVG00013430001 I 0.000
GRMZM2G019266 Zea mays GRMZM2G019266 I 0.000
GRMZM2G005236 Zea mays GRMZM2G005236 I 0.000