HNRPDL (Erinaceus europaeus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSEEUG00000004301 T36759_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
HNRNPAB
M301_0.6 		Homo sapiens Sequence logo not available ACAAAGACAAA SELEX
Cook et al.(2011)
39_12419250 		0.700
HNRNPAB
M210_0.6 		Tetraodon nigroviridis WRGWUAG RNAcompete
Ray et al.(2013)
RNCMPT00245 		0.700
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSEEUP00000003913 RRM 147 216
ENSEEUP00000003913 RRM 232 301

Links

Other RRM family RBPs
Other Erinaceus europaeus RBPs

106 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Ame_R000243 Ailuropoda melanoleuca Ame_R000243 I 0.706
Ame_R000242 Ailuropoda melanoleuca Ame_R000242 I 0.986
Ame_R012484 Ailuropoda melanoleuca Ame_R012484 I 0.707
HNRNPD Anolis carolinensis ENSACAG00000010342 I 0.706
HNRNPAB Anolis carolinensis ENSACAG00000016946 I 0.707
A4IF81_BOVIN Bos taurus ENSBTAG00000014804 I 0.986
A5D9H5_BOVIN Bos taurus ENSBTAG00000013952 I 0.711
Q3ZC44_BOVIN Bos taurus ENSBTAG00000013627 I 0.700
LOC100397832 Callithrix jacchus ENSCJAG00000031195 I 0.706
LOC100412686 Callithrix jacchus ENSCJAG00000015197 I 0.986
LOC100400250 Callithrix jacchus ENSCJAG00000015165 I 0.711
LOC100404672 Callithrix jacchus ENSCJAG00000005154 I 0.971
HNRPDL Callithrix jacchus ENSCJAG00000004101 N 0.829
ENSCAFG00000008940 Canis familiaris ENSCAFG00000008940 I 0.986
ENSCAFG00000005858 Canis familiaris ENSCAFG00000005858 N 0.929
HNRNPAB Canis familiaris ENSCAFG00000000241 I 0.700
HNRNPD Canis familiaris ENSCAFG00000025045 I 0.711
ENSCPOG00000015619 Cavia porcellus ENSCPOG00000015619 I 0.986
HNRNPAB Cavia porcellus ENSCPOG00000025972 I 0.700
ENSCHOG00000000160 Choloepus hoffmanni ENSCHOG00000000160 I 0.986
ENSCHOG00000002938 Choloepus hoffmanni ENSCHOG00000002938 N 0.950
ENSCHOG00000003275 Choloepus hoffmanni ENSCHOG00000003275 N 0.936
ENSCHOG00000009204 Choloepus hoffmanni ENSCHOG00000009204 N 0.871
ENSCHOG00000010831 Choloepus hoffmanni ENSCHOG00000010831 N 0.964
hnrpdl Danio rerio ENSDARG00000003429 N 0.843
HNRNPAB Dasypus novemcinctus ENSDNOG00000013820 I 0.700
ENSDNOG00000003887 Dasypus novemcinctus ENSDNOG00000003887 I 0.986
ENSDORG00000000968 Dipodomys ordii ENSDORG00000000968 I 0.986
HNRNPD Echinops telfairi ENSETEG00000016709 I 0.711
LOC100060733 Equus caballus ENSECAG00000009344 I 0.711
ENSECAG00000018242 Equus caballus ENSECAG00000018242 I 0.700
Q6X9Z3_HORSE Equus caballus ENSECAG00000022692 I 0.986
HNRNPD Erinaceus europaeus ENSEEUG00000007552 I 0.702
HNRPDL Felis catus ENSFCAG00000000455 N 0.936
HNRDL_CHICK Gallus gallus ENSGALG00000023199 I 0.979
Q5ZIH1_CHICK Gallus gallus ENSGALG00000011184 I 0.713
HNRNPAB Gasterosteus aculeatus ENSGACG00000020830 I 0.700
HNRNPAB Gasterosteus aculeatus ENSGACG00000018116 I 0.700
HNRNPD Gorilla gorilla ENSGGOG00000026760 I 0.711
HNRNPAB Gorilla gorilla ENSGGOG00000011692 I 0.700
HNRPDL Gorilla gorilla ENSGGOG00000003714 I 0.986
HNRNPD Homo sapiens ENSG00000138668 I 0.711
HNRPDL Homo sapiens ENSG00000152795 I 0.986
HNRNPAB Homo sapiens ENSG00000197451 D 0.700
HNRNPD Loxodonta africana ENSLAFG00000016483 I 0.706
ENSLAFG00000008612 Loxodonta africana ENSLAFG00000008612 I 0.986
HNRNPAB Loxodonta africana ENSLAFG00000001189 I 0.700
HNRPDL Macaca mulatta ENSMMUG00000015777 I 0.986
HNRNPD Macaca mulatta ENSMMUG00000014030 I 0.711
HNRNPAB Macaca mulatta ENSMMUG00000003996 I 0.707
HNRPDL Macropus eugenii ENSMEUG00000010033 N 0.831
ENSMEUG00000011454 Macropus eugenii ENSMEUG00000011454 I 0.979
HNRPDL Meleagris gallopavo ENSMGAG00000008033 I 0.979
HNRNPD Meleagris gallopavo ENSMGAG00000008051 I 0.713
HNRNPD Microcebus murinus ENSMICG00000010984 I 0.706
HNRPDL Microcebus murinus ENSMICG00000001445 I 0.986
ENSMODG00000011916 Monodelphis domestica ENSMODG00000011916 I 0.979
HNRNPD Monodelphis domestica ENSMODG00000011898 I 0.711
ENSMODG00000006825 Monodelphis domestica ENSMODG00000006825 I 0.950
Hnrnpd Mus musculus ENSMUSG00000000568 I 0.711
Hnrpdl Mus musculus ENSMUSG00000029328 I 0.986
HNRPDL Myotis lucifugus ENSMLUG00000014452 I 0.971
HNRPDL Ochotona princeps ENSOPRG00000007178 I 0.986
HNRNPAB Ochotona princeps ENSOPRG00000002546 I 0.700
HNRNPD Ochotona princeps ENSOPRG00000009336 I 0.711
HNRPDL Ornithorhynchus anatinus ENSOANG00000004651 I 0.986
HNRNPD Ornithorhynchus anatinus ENSOANG00000001932 I 0.713
HNRNPD Oryctolagus cuniculus ENSOCUG00000001357 I 0.706
HNRPDL Oryctolagus cuniculus ENSOCUG00000013805 I 0.986
HNRNPAB Oryzias latipes ENSORLG00000005327 I 0.721
HNRPDL Otolemur garnettii ENSOGAG00000002501 N 0.957
XR_022913.1 Pan troglodytes ENSPTRG00000017601 I 0.700
HNRPDL Pan troglodytes ENSPTRG00000016217 I 0.986
HNRNPD Pan troglodytes ENSPTRG00000016215 I 0.711
ENSPPYG00000014885 Pongo pygmaeus ENSPPYG00000014885 I 0.711
ENSPPYG00000014886 Pongo pygmaeus ENSPPYG00000014886 I 0.986
HNRPDL Procavia capensis ENSPCAG00000011543 I 0.986
HNRNPD Pteropus vampyrus ENSPVAG00000000003 I 0.711
HNRPDL Pteropus vampyrus ENSPVAG00000006816 N 0.814
D3ZN89_RAT Rattus norvegicus ENSRNOG00000002270 I 0.986
Hnrpd Rattus norvegicus ENSRNOG00000002292 I 0.704
HNRPDL Sorex araneus ENSSARG00000009961 N 0.721
HNRNPD Sorex araneus ENSSARG00000006883 I 0.702
HNRPDL Spermophilus tridecemlineatus ENSSTOG00000013979 I 0.986
HNRNPD Spermophilus tridecemlineatus ENSSTOG00000013970 I 0.711
HNRNPD Taeniopygia guttata ENSTGUG00000002858 I 0.711
HNRPDL Taeniopygia guttata ENSTGUG00000002850 I 0.979
HNRNPAB Takifugu rubripes ENSTRUG00000000612 I 0.714
HNRNPD Tarsius syrichta ENSTSYG00000010395 I 0.706
HNRNPAB Tetraodon nigroviridis ENSTNIG00000010512 D 0.700
HNRPDL Tupaia belangeri ENSTBEG00000002817 I 0.986
HNRNPD Tursiops truncatus ENSTTRG00000007592 I 0.711
HNRPDL Tursiops truncatus ENSTTRG00000001793 I 0.979
HNRNPD Vicugna pacos ENSVPAG00000004374 I 0.706
ABV54637 Xenopus laevis ABV54637 I 0.707
AAH74212 Xenopus laevis AAH74212 I 0.707
AAH68788 Xenopus laevis AAH68788 N 0.900
CBU92545 Xenopus laevis CBU92545 N 0.900
AAH43814 Xenopus laevis AAH43814 I 0.700
Q6NU14 Xenopus laevis Q6NU14 N 0.900
Q7ZX83 Xenopus laevis Q7ZX83 N 0.886
AAH45124 Xenopus laevis AAH45124 N 0.886
CBF67671 Xenopus laevis CBF67671 N 0.900
hnrnpab Xenopus tropicalis ENSXETG00000003836 I 0.714
hnrpdl Xenopus tropicalis ENSXETG00000023026 I 0.907
hnrnpd Xenopus tropicalis ENSXETG00000012569 I 0.711