HNRNPD (Erinaceus europaeus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSEEUG00000007552 T36790_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
HNRNPAB
M301_0.6 		Homo sapiens Sequence logo not available ACAAAGACAAA SELEX
Cook et al.(2011)
39_12419250 		0.752
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSEEUP00000006866 RRM 98 167
ENSEEUP00000006866 RRM 183 250

Links

Other RRM family RBPs
Other Erinaceus europaeus RBPs

113 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
HNRNPD Sorex araneus ENSSARG00000006883 I 1.000
HNRNPD Macaca mulatta ENSMMUG00000014030 I 0.979
HNRNPD Taeniopygia guttata ENSTGUG00000002858 I 0.979
Hnrnpd Mus musculus ENSMUSG00000000568 I 0.979
HNRNPD Pteropus vampyrus ENSPVAG00000000003 I 0.979
HNRNPD Pan troglodytes ENSPTRG00000016215 I 0.979
HNRNPD Canis familiaris ENSCAFG00000025045 I 0.979
LOC100400250 Callithrix jacchus ENSCJAG00000015165 I 0.979
HNRNPD Gorilla gorilla ENSGGOG00000026760 I 0.979
HNRNPD Echinops telfairi ENSETEG00000016709 I 0.979
HNRNPD Spermophilus tridecemlineatus ENSSTOG00000013970 I 0.979
HNRNPD Homo sapiens ENSG00000138668 I 0.979
HNRNPD Ochotona princeps ENSOPRG00000009336 I 0.979
LOC100060733 Equus caballus ENSECAG00000009344 I 0.979
ENSPPYG00000014885 Pongo pygmaeus ENSPPYG00000014885 I 0.979
A5D9H5_BOVIN Bos taurus ENSBTAG00000013952 I 0.979
HNRNPD Tursiops truncatus ENSTTRG00000007592 I 0.979
HNRNPD Tarsius syrichta ENSTSYG00000010395 I 0.972
HNRNPD Oryctolagus cuniculus ENSOCUG00000001357 I 0.972
HNRNPD Microcebus murinus ENSMICG00000010984 I 0.972
HNRNPD Monodelphis domestica ENSMODG00000011898 I 0.972
Ame_R000243 Ailuropoda melanoleuca Ame_R000243 I 0.972
LOC100397832 Callithrix jacchus ENSCJAG00000031195 I 0.972
HNRNPD Vicugna pacos ENSVPAG00000004374 I 0.972
HNRNPD Loxodonta africana ENSLAFG00000016483 I 0.972
Hnrpd Rattus norvegicus ENSRNOG00000002292 I 0.972
HNRNPD Meleagris gallopavo ENSMGAG00000008051 I 0.965
Q5ZIH1_CHICK Gallus gallus ENSGALG00000011184 I 0.965
HNRNPD Ornithorhynchus anatinus ENSOANG00000001932 I 0.965
Hnrnpd Dipodomys ordii ENSDORG00000012507 I 0.965
HNRNPD Choloepus hoffmanni ENSCHOG00000000045 I 0.965
HNRNPD Myotis lucifugus ENSMLUG00000010628 I 0.957
HNRNPD Anolis carolinensis ENSACAG00000010342 I 0.944
hnrnpd Xenopus tropicalis ENSXETG00000012569 I 0.936
HNRNPD Procavia capensis ENSPCAG00000002182 I 0.936
AAH97855 Xenopus laevis AAH97855 I 0.929
AAU25946 Xenopus laevis AAU25946 I 0.929
HNRNPD Tupaia belangeri ENSTBEG00000002327 N 0.887
hnrnpd Danio rerio ENSDARG00000059246 I 0.880
HNRNPD Takifugu rubripes ENSTRUG00000018450 I 0.879
HNRNPD Oryzias latipes ENSORLG00000001833 I 0.871
HNRNPD Tetraodon nigroviridis ENSTNIG00000013499 I 0.858
HNRNPD Gasterosteus aculeatus ENSGACG00000015669 N 0.853
HNRNPD Otolemur garnettii ENSOGAG00000004075 N 0.809
HNRNPAB Monodelphis domestica ENSMODG00000004217 I 0.794
HNRNPAB Macropus eugenii ENSMEUG00000007909 I 0.794
HNRNPAB Anolis carolinensis ENSACAG00000016946 I 0.773
HNRNPAB Ornithorhynchus anatinus ENSOANG00000004998 I 0.773
HNRNPAB Danio rerio ENSDARG00000017568 I 0.759
HNRNPAB Gorilla gorilla ENSGGOG00000011692 I 0.752
HNRNPAB Dasypus novemcinctus ENSDNOG00000013820 I 0.752
XR_022913.1 Pan troglodytes ENSPTRG00000017601 I 0.752
HNRNPAB Homo sapiens ENSG00000197451 D 0.752
hnrnpab Danio rerio ENSDARG00000007960 I 0.752
hnrnpab Xenopus tropicalis ENSXETG00000003836 I 0.752
Ame_R012484 Ailuropoda melanoleuca Ame_R012484 I 0.745
ENSECAG00000018242 Equus caballus ENSECAG00000018242 I 0.745
Q3ZC44_BOVIN Bos taurus ENSBTAG00000013627 I 0.745
HNRNPAB Taeniopygia guttata ENSTGUG00000001168 I 0.745
HNRNPAB Cavia porcellus ENSCPOG00000025972 I 0.745
HNRNPAB Canis familiaris ENSCAFG00000000241 I 0.745
HNRNPAB Pteropus vampyrus ENSPVAG00000016742 I 0.745
HNRNPAB Macaca mulatta ENSMMUG00000003996 I 0.745
HNRNPAB Meleagris gallopavo ENSMGAG00000007727 I 0.745
HNRNPAB Loxodonta africana ENSLAFG00000001189 I 0.745
Q90626_CHICK Gallus gallus ENSGALG00000014381 I 0.745
HNRNPAB Procavia capensis ENSPCAG00000006760 I 0.745
Hnrnpab Mus musculus ENSMUSG00000020358 I 0.745
Hnrnpab Rattus norvegicus ENSRNOG00000003645 I 0.745
ENSPPYG00000016107 Pongo pygmaeus ENSPPYG00000016107 I 0.739
HNRNPAB Oryctolagus cuniculus ENSOCUG00000026424 I 0.739
HNRNPAB Ochotona princeps ENSOPRG00000002546 I 0.738
AAH74212 Xenopus laevis AAH74212 I 0.730
HNRNPAB Gasterosteus aculeatus ENSGACG00000018116 I 0.730
ABV54637 Xenopus laevis ABV54637 I 0.730
AAH43814 Xenopus laevis AAH43814 I 0.730
ENSCJAG00000032456 Callithrix jacchus ENSCJAG00000032456 I 0.723
ENSCHOG00000000160 Choloepus hoffmanni ENSCHOG00000000160 I 0.716
LOC100412686 Callithrix jacchus ENSCJAG00000015197 I 0.716
HNRPDL Microcebus murinus ENSMICG00000001445 I 0.716
ENSDNOG00000003887 Dasypus novemcinctus ENSDNOG00000003887 I 0.716
Q6X9Z3_HORSE Equus caballus ENSECAG00000022692 I 0.716
HNRPDL Gorilla gorilla ENSGGOG00000003714 I 0.716
D3ZN89_RAT Rattus norvegicus ENSRNOG00000002270 I 0.716
ENSCPOG00000015619 Cavia porcellus ENSCPOG00000015619 I 0.716
ENSCAFG00000008940 Canis familiaris ENSCAFG00000008940 I 0.716
ENSDORG00000000968 Dipodomys ordii ENSDORG00000000968 I 0.716
HNRPDL Tupaia belangeri ENSTBEG00000002817 I 0.716
ENSLAFG00000008612 Loxodonta africana ENSLAFG00000008612 I 0.716
ENSMEUG00000011454 Macropus eugenii ENSMEUG00000011454 I 0.716
HNRPDL Macaca mulatta ENSMMUG00000015777 I 0.716
HNRPDL Ochotona princeps ENSOPRG00000007178 I 0.716
Ame_R000242 Ailuropoda melanoleuca Ame_R000242 I 0.716
HNRPDL Pan troglodytes ENSPTRG00000016217 I 0.716
HNRPDL Tursiops truncatus ENSTTRG00000001793 I 0.716
ENSPPYG00000014886 Pongo pygmaeus ENSPPYG00000014886 I 0.716
HNRPDL Procavia capensis ENSPCAG00000011543 I 0.716
HNRPDL Ornithorhynchus anatinus ENSOANG00000004651 I 0.716
HNRPDL Oryctolagus cuniculus ENSOCUG00000013805 I 0.716
ENSMODG00000011916 Monodelphis domestica ENSMODG00000011916 I 0.716
Hnrpdl Mus musculus ENSMUSG00000029328 I 0.716
HNRPDL Spermophilus tridecemlineatus ENSSTOG00000013979 I 0.716
HNRPDL Homo sapiens ENSG00000152795 I 0.716
A4IF81_BOVIN Bos taurus ENSBTAG00000014804 I 0.716
HNRDL_CHICK Gallus gallus ENSGALG00000023199 I 0.709
HNRNPAB Oryzias latipes ENSORLG00000005327 I 0.709
HNRPDL Taeniopygia guttata ENSTGUG00000002850 I 0.709
HNRPDL Meleagris gallopavo ENSMGAG00000008033 I 0.709
LOC100404672 Callithrix jacchus ENSCJAG00000005154 I 0.709
HNRPDL Erinaceus europaeus ENSEEUG00000004301 I 0.702
ENSMODG00000006825 Monodelphis domestica ENSMODG00000006825 I 0.702
HNRPDL Myotis lucifugus ENSMLUG00000014452 I 0.702
hnrpdl Xenopus tropicalis ENSXETG00000023026 I 0.700