Ame_R012484 (Ailuropoda melanoleuca)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 Ame_R012484 T55596_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
HNRNPAB
M301_0.6 		Homo sapiens Sequence logo not available ACAAAGACAAA SELEX
Cook et al.(2011)
39_12419250 		0.986
HNRNPAB
M210_0.6 		Tetraodon nigroviridis WRGWUAG RNAcompete
Ray et al.(2013)
RNCMPT00245 		0.807
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
Ame_R012484 RRM 56 125
Ame_R012484 RRM 140 209

Links

Other RRM family RBPs
Other Ailuropoda melanoleuca RBPs

127 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ENSECAG00000018242 Equus caballus ENSECAG00000018242 I 0.993
Q3ZC44_BOVIN Bos taurus ENSBTAG00000013627 I 0.993
HNRNPAB Macaca mulatta ENSMMUG00000003996 I 0.993
HNRNPAB Canis familiaris ENSCAFG00000000241 I 0.993
HNRNPAB Dasypus novemcinctus ENSDNOG00000013820 I 0.993
HNRNPAB Ochotona princeps ENSOPRG00000002546 I 0.993
HNRNPAB Homo sapiens ENSG00000197451 D 0.986
XR_022913.1 Pan troglodytes ENSPTRG00000017601 I 0.986
HNRNPAB Gorilla gorilla ENSGGOG00000011692 I 0.986
HNRNPAB Cavia porcellus ENSCPOG00000025972 I 0.979
HNRNPAB Loxodonta africana ENSLAFG00000001189 I 0.979
ENSPPYG00000016107 Pongo pygmaeus ENSPPYG00000016107 I 0.972
HNRNPAB Pteropus vampyrus ENSPVAG00000016742 I 0.971
HNRNPAB Oryctolagus cuniculus ENSOCUG00000026424 I 0.965
HNRNPAB Procavia capensis ENSPCAG00000006760 I 0.964
ENSCJAG00000032456 Callithrix jacchus ENSCJAG00000032456 I 0.957
Hnrnpab Mus musculus ENSMUSG00000020358 I 0.950
Hnrnpab Rattus norvegicus ENSRNOG00000003645 I 0.950
HNRNPAB Ornithorhynchus anatinus ENSOANG00000004998 I 0.943
Q90626_CHICK Gallus gallus ENSGALG00000014381 I 0.929
HNRNPAB Taeniopygia guttata ENSTGUG00000001168 I 0.929
HNRNPAB Meleagris gallopavo ENSMGAG00000007727 I 0.929
HNRNPAB Anolis carolinensis ENSACAG00000016946 I 0.921
HNRNPAB Monodelphis domestica ENSMODG00000004217 I 0.914
HNRNPAB Macropus eugenii ENSMEUG00000007909 I 0.914
hnrnpab Xenopus tropicalis ENSXETG00000003836 I 0.907
AAH74212 Xenopus laevis AAH74212 I 0.893
ABV54637 Xenopus laevis ABV54637 I 0.893
ENSGGOG00000028444 Gorilla gorilla ENSGGOG00000028444 I 0.886
AAH43814 Xenopus laevis AAH43814 I 0.879
LOC100390818 Callithrix jacchus ENSCJAG00000012235 I 0.879
HNRNPAB Sus scrofa ENSSSCG00000001932 I 0.858
hnrnpab Danio rerio ENSDARG00000007960 I 0.850
HNRNPAB Gasterosteus aculeatus ENSGACG00000020830 I 0.836
HNRNPAB Danio rerio ENSDARG00000017568 I 0.836
HNRNPAB Takifugu rubripes ENSTRUG00000008411 I 0.829
HNRNPAB Oryzias latipes ENSORLG00000005327 I 0.821
HNRNPAB Tetraodon nigroviridis ENSTNIG00000007596 I 0.814
HNRNPAB Oryzias latipes ENSORLG00000015501 I 0.809
HNRNPAB Gasterosteus aculeatus ENSGACG00000018116 I 0.807
HNRNPAB Takifugu rubripes ENSTRUG00000000612 I 0.807
HNRNPAB Tetraodon nigroviridis ENSTNIG00000010512 D 0.807
HNRNPAB Tursiops truncatus ENSTTRG00000010604 I 0.793
HNRNPD Anolis carolinensis ENSACAG00000010342 I 0.762
HNRNPD Tetraodon nigroviridis ENSTNIG00000013499 I 0.759
HNRNPD Ornithorhynchus anatinus ENSOANG00000001932 I 0.755
LOC100400250 Callithrix jacchus ENSCJAG00000015165 I 0.754
HNRNPD Tursiops truncatus ENSTTRG00000007592 I 0.754
HNRNPD Macaca mulatta ENSMMUG00000014030 I 0.754
HNRNPD Canis familiaris ENSCAFG00000025045 I 0.754
HNRNPD Ochotona princeps ENSOPRG00000009336 I 0.754
HNRNPD Monodelphis domestica ENSMODG00000011898 I 0.754
HNRNPD Myotis lucifugus ENSMLUG00000010628 I 0.754
Hnrnpd Mus musculus ENSMUSG00000000568 I 0.754
A5D9H5_BOVIN Bos taurus ENSBTAG00000013952 I 0.754
HNRNPD Oryzias latipes ENSORLG00000001833 I 0.754
HNRNPD Echinops telfairi ENSETEG00000016709 I 0.754
HNRNPD Homo sapiens ENSG00000138668 I 0.754
HNRNPD Pteropus vampyrus ENSPVAG00000000003 I 0.754
ENSPPYG00000014885 Pongo pygmaeus ENSPPYG00000014885 I 0.754
LOC100060733 Equus caballus ENSECAG00000009344 I 0.754
HNRNPD Gorilla gorilla ENSGGOG00000026760 I 0.754
HNRNPD Taeniopygia guttata ENSTGUG00000002858 I 0.754
HNRNPD Spermophilus tridecemlineatus ENSSTOG00000013970 I 0.754
hnrnpd Danio rerio ENSDARG00000059246 I 0.754
HNRNPD Pan troglodytes ENSPTRG00000016215 I 0.754
HNRNPD Oryctolagus cuniculus ENSOCUG00000001357 I 0.748
Ame_R000243 Ailuropoda melanoleuca Ame_R000243 I 0.748
HNRNPD Vicugna pacos ENSVPAG00000004374 I 0.748
HNRNPD Microcebus murinus ENSMICG00000010984 I 0.748
Q5ZIH1_CHICK Gallus gallus ENSGALG00000011184 I 0.748
HNRNPD Loxodonta africana ENSLAFG00000016483 I 0.748
LOC100397832 Callithrix jacchus ENSCJAG00000031195 I 0.748
HNRNPD Tarsius syrichta ENSTSYG00000010395 I 0.748
HNRNPD Meleagris gallopavo ENSMGAG00000008051 I 0.748
hnrnpd Xenopus tropicalis ENSXETG00000012569 I 0.746
Hnrpd Rattus norvegicus ENSRNOG00000002292 I 0.746
HNRNPD Erinaceus europaeus ENSEEUG00000007552 I 0.745
HNRNPD Sorex araneus ENSSARG00000006883 I 0.745
HNRNPD Choloepus hoffmanni ENSCHOG00000000045 I 0.741
Hnrnpd Dipodomys ordii ENSDORG00000012507 I 0.741
LOC100069254 Equus caballus ENSECAG00000014816 I 0.739
HNRNPAB Erinaceus europaeus ENSEEUG00000013226 I 0.736
HNRNPD Takifugu rubripes ENSTRUG00000018450 I 0.730
HNRDL_CHICK Gallus gallus ENSGALG00000023199 I 0.729
HNRPDL Taeniopygia guttata ENSTGUG00000002850 I 0.729
HNRPDL Meleagris gallopavo ENSMGAG00000008033 I 0.729
AAH97855 Xenopus laevis AAH97855 I 0.725
AAU25946 Xenopus laevis AAU25946 I 0.725
HNRPDL Pan troglodytes ENSPTRG00000016217 I 0.721
HNRPDL Spermophilus tridecemlineatus ENSSTOG00000013979 I 0.721
HNRPDL Tursiops truncatus ENSTTRG00000001793 I 0.721
HNRPDL Tupaia belangeri ENSTBEG00000002817 I 0.721
D3ZN89_RAT Rattus norvegicus ENSRNOG00000002270 I 0.721
Ame_R000242 Ailuropoda melanoleuca Ame_R000242 I 0.721
HNRPDL Microcebus murinus ENSMICG00000001445 I 0.721
Q6X9Z3_HORSE Equus caballus ENSECAG00000022692 I 0.721
ENSPPYG00000014886 Pongo pygmaeus ENSPPYG00000014886 I 0.721
HNRPDL Homo sapiens ENSG00000152795 I 0.721
HNRPDL Gorilla gorilla ENSGGOG00000003714 I 0.721
ENSDORG00000000968 Dipodomys ordii ENSDORG00000000968 I 0.721
ENSDNOG00000003887 Dasypus novemcinctus ENSDNOG00000003887 I 0.721
ENSCHOG00000000160 Choloepus hoffmanni ENSCHOG00000000160 I 0.721
A4IF81_BOVIN Bos taurus ENSBTAG00000014804 I 0.721
LOC100412686 Callithrix jacchus ENSCJAG00000015197 I 0.721
ENSCPOG00000015619 Cavia porcellus ENSCPOG00000015619 I 0.721
ENSLAFG00000008612 Loxodonta africana ENSLAFG00000008612 I 0.721
ENSMEUG00000011454 Macropus eugenii ENSMEUG00000011454 I 0.721
HNRPDL Ornithorhynchus anatinus ENSOANG00000004651 I 0.721
HNRPDL Oryctolagus cuniculus ENSOCUG00000013805 I 0.721
HNRPDL Ochotona princeps ENSOPRG00000007178 I 0.721
HNRPDL Procavia capensis ENSPCAG00000011543 I 0.721
ENSCAFG00000008940 Canis familiaris ENSCAFG00000008940 I 0.721
Hnrpdl Mus musculus ENSMUSG00000029328 I 0.721
ENSMODG00000011916 Monodelphis domestica ENSMODG00000011916 I 0.721
HNRPDL Macaca mulatta ENSMMUG00000015777 I 0.721
HNRNPD Procavia capensis ENSPCAG00000002182 I 0.718
HNRPDL Myotis lucifugus ENSMLUG00000014452 I 0.714
LOC100404672 Callithrix jacchus ENSCJAG00000005154 I 0.714
hnrpdl Xenopus tropicalis ENSXETG00000023026 I 0.714
HNRPDL Erinaceus europaeus ENSEEUG00000004301 I 0.707
ENSMODG00000006825 Monodelphis domestica ENSMODG00000006825 I 0.707
CBF67671 Xenopus laevis CBF67671 N 0.700
AAH68788 Xenopus laevis AAH68788 N 0.700
CBU92545 Xenopus laevis CBU92545 N 0.700
Q6NU14 Xenopus laevis Q6NU14 N 0.700
ENSCHOG00000010831 Choloepus hoffmanni ENSCHOG00000010831 N 0.700