SAFB (Microcebus murinus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSMICG00000008739 T38529_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSMICP00000007968 RRM 402 471

Links

Other RRM family RBPs
Other Microcebus murinus RBPs

121 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
DGIL_AUG5s7140g4t1 Acyrtosiphon pisum DGIL_AUG5s7140g4t1 N 0.775
DGIL_AUG5s8592g2t1 Acyrtosiphon pisum DGIL_AUG5s8592g2t1 N 0.761
AAEL001352 Aedes aegypti AAEL001352 N 0.761
Ame_R016389 Ailuropoda melanoleuca Ame_R016389 N 1.000
Ame_R015170 Ailuropoda melanoleuca Ame_R015170 N 0.732
Ame_R016388 Ailuropoda melanoleuca Ame_R016388 N 0.887
ENSACAG00000016893 Anolis carolinensis ENSACAG00000016893 N 0.901
ENSACAG00000016928 Anolis carolinensis ENSACAG00000016928 N 0.914
SLTM Anolis carolinensis ENSACAG00000015120 N 0.718
AGAP001298 Anopheles gambiae AGAP001298 N 0.746
amel4_ncbi_hmm13354 Apis mellifera amel4_ncbi_hmm13354 N 0.803
LOC787645 Bos taurus ENSBTAG00000035584 N 0.971
SLTM Bos taurus ENSBTAG00000011319 N 0.732
ENSBTAG00000007875 Bos taurus ENSBTAG00000007875 N 1.000
SAFB2 Bos taurus ENSBTAG00000001790 N 0.915
A7E314_BOVIN Bos taurus ENSBTAG00000035585 N 1.000
estExt_fgenesh2_pg.C_4200008 Branchiostoma floridae estExt_fgenesh2_pg.C_4200008 N 0.859
estExt_fgenesh2_pg.C_3630023 Branchiostoma floridae estExt_fgenesh2_pg.C_3630023 N 0.859
SAFB Callithrix jacchus ENSCJAG00000017081 N 1.000
SAFB2 Callithrix jacchus ENSCJAG00000017205 N 0.915
SLTM Callithrix jacchus ENSCJAG00000020395 N 0.732
SLTM Canis familiaris ENSCAFG00000016586 N 0.732
SAFB2 Canis familiaris ENSCAFG00000018814 N 0.901
SAFB Canis familiaris ENSCAFG00000018803 N 1.000
fgenesh1_pm.C_scaffold_151000005 Capitella teleta fgenesh1_pm.C_scaffold_151000005 N 0.817
SLTM Cavia porcellus ENSCPOG00000026109 N 0.732
SAFB Cavia porcellus ENSCPOG00000026322 N 0.957
SAFB2 Cavia porcellus ENSCPOG00000011394 N 0.930
SLTM Choloepus hoffmanni ENSCHOG00000001125 N 0.714
CpipJ_CPIJ012814 Culex pipiens CpipJ_CPIJ012814 N 0.746
CPIJ012814 Culex quinquefasciatus CPIJ012814 N 0.746
safb Danio rerio ENSDARG00000020467 N 0.901
ENSDARG00000017150 Danio rerio ENSDARG00000017150 N 0.718
SLTM Dasypus novemcinctus ENSDNOG00000002975 N 0.732
SAFB Dasypus novemcinctus ENSDNOG00000015746 N 1.000
Safb Dipodomys ordii ENSDORG00000016200 N 1.000
Safb2 Dipodomys ordii ENSDORG00000016199 N 0.873
Sltm Dipodomys ordii ENSDORG00000007463 N 0.732
SAFB Echinops telfairi ENSETEG00000018679 N 0.986
SAFB2 Echinops telfairi ENSETEG00000016756 N 0.930
SLTM Echinops telfairi ENSETEG00000008003 N 0.746
LOC100064922 Equus caballus ENSECAG00000018978 N 0.915
LOC100064953 Equus caballus ENSECAG00000018659 N 0.986
LOC100068259 Equus caballus ENSECAG00000011267 N 0.732
SLTM Erinaceus europaeus ENSEEUG00000000580 N 0.718
SAFB Felis catus ENSFCAG00000011835 N 1.000
SAFB2 Felis catus ENSFCAG00000011834 N 0.901
SLTM Felis catus ENSFCAG00000004826 N 0.718
SAFB2 Gallus gallus ENSGALG00000013365 N 0.957
SLTM Gallus gallus ENSGALG00000004192 N 0.746
SAFB2 Gallus gallus ENSGALG00000001948 N 0.944
SAFB Gasterosteus aculeatus ENSGACG00000011385 N 0.901
SAFB2 Gorilla gorilla ENSGGOG00000015093 N 0.915
SAFB Gorilla gorilla ENSGGOG00000015109 N 1.000
168846 Helobdella robusta 168846 N 0.761
SAFB Homo sapiens ENSG00000160633 N 1.000
SLTM Homo sapiens ENSG00000137776 N 0.732
SAFB2 Homo sapiens ENSG00000130254 N 0.915
estExt_fgenesh2_pg.C_sca_50258 Lottia gigantea estExt_fgenesh2_pg.C_sca_50258 N 0.817
SLTM Loxodonta africana ENSLAFG00000017922 N 0.732
SAFB Loxodonta africana ENSLAFG00000003840 N 0.986
SAFB2 Loxodonta africana ENSLAFG00000003836 N 0.915
SLTM Macaca mulatta ENSMMUG00000022200 N 0.732
SAFB Macaca mulatta ENSMMUG00000017970 N 1.000
SAFB2 Macaca mulatta ENSMMUG00000017968 N 0.915
SAFB2 Macropus eugenii ENSMEUG00000002456 N 0.929
ENSMGAG00000001101 Meleagris gallopavo ENSMGAG00000001101 N 0.957
SLTM Meleagris gallopavo ENSMGAG00000005313 N 0.746
ENSMGAG00000001051 Meleagris gallopavo ENSMGAG00000001051 N 0.944
SLTM Microcebus murinus ENSMICG00000013069 N 0.718
XM_001377567.1 Monodelphis domestica ENSMODG00000008794 N 0.732
SAFB2 Monodelphis domestica ENSMODG00000001178 N 0.930
ENSMODG00000001236 Monodelphis domestica ENSMODG00000001236 N 0.971
Safb Mus musculus ENSMUSG00000071054 N 0.971
Safb2 Mus musculus ENSMUSG00000042625 N 0.845
Sltm Mus musculus ENSMUSG00000032212 N 0.718
SAFB Myotis lucifugus ENSMLUG00000001081 N 1.000
SAFB2 Myotis lucifugus ENSMLUG00000001050 N 0.930
nasonia_NCBI_hmm598374 Nasonia vitripennis nasonia_NCBI_hmm598374 N 0.732
SAFB Ochotona princeps ENSOPRG00000011561 N 0.986
ENSOANG00000013644 Ornithorhynchus anatinus ENSOANG00000013644 N 0.930
SLTM Ornithorhynchus anatinus ENSOANG00000012311 N 0.732
SLTM Oryctolagus cuniculus ENSOCUG00000003327 N 0.732
SAFB2 Oryctolagus cuniculus ENSOCUG00000001592 N 0.915
SAFB Oryctolagus cuniculus ENSOCUG00000014628 N 1.000
SAFB Oryzias latipes ENSORLG00000016989 N 0.887
SLTM Oryzias latipes ENSORLG00000008161 N 0.704
SAFB2 Otolemur garnettii ENSOGAG00000006855 N 0.915
SLTM Otolemur garnettii ENSOGAG00000011297 N 0.732
SAFB Pan troglodytes ENSPTRG00000010335 N 0.986
SLTM Pan troglodytes ENSPTRG00000007121 N 0.732
SAFB2 Pan troglodytes ENSPTRG00000010334 N 0.915
PHUM451590 Pediculus humanus PHUM451590 N 0.704
ENSPPYG00000006515 Pongo pygmaeus ENSPPYG00000006515 N 0.732
ENSPPYG00000009427 Pongo pygmaeus ENSPPYG00000009427 N 0.915
ENSPPYG00000009428 Pongo pygmaeus ENSPPYG00000009428 N 1.000
SAFB2 Procavia capensis ENSPCAG00000006352 N 0.944
SLTM Pteropus vampyrus ENSPVAG00000015056 N 0.732
SAFB Pteropus vampyrus ENSPVAG00000004913 N 1.000
Sltm Rattus norvegicus ENSRNOG00000013708 N 0.732
SAFB Sorex araneus ENSSARG00000010475 N 1.000
SAFB2 Sorex araneus ENSSARG00000000649 N 0.930
SAFB2 Spermophilus tridecemlineatus ENSSTOG00000002758 N 0.915
ENSSSCG00000013523 Sus scrofa ENSSSCG00000013523 N 0.915
ENSSSCG00000004592 Sus scrofa ENSSSCG00000004592 N 0.718
ENSSSCG00000004591 Sus scrofa ENSSSCG00000004591 N 0.718
SAFB-1 Taeniopygia guttata ENSTGUG00000000489 N 0.944
SAFB-2 Taeniopygia guttata ENSTGUG00000000502 N 0.957
SLTM Taeniopygia guttata ENSTGUG00000006017 N 0.746
SAFB Takifugu rubripes ENSTRUG00000003567 N 0.901
SAFB Tarsius syrichta ENSTSYG00000001851 N 1.000
ENSTNIG00000015470 Tetraodon nigroviridis ENSTNIG00000015470 N 0.901
SLTM Tupaia belangeri ENSTBEG00000000945 N 0.732
SAFB Tursiops truncatus ENSTTRG00000013588 N 1.000
SAFB2 Tursiops truncatus ENSTTRG00000013585 N 0.915
SLTM Tursiops truncatus ENSTTRG00000005246 N 0.732
SAFB Vicugna pacos ENSVPAG00000012043 N 1.000
SLTM Vicugna pacos ENSVPAG00000008606 N 0.732
AAI00172 Xenopus laevis AAI00172 N 0.718
Q498L2 Xenopus laevis Q498L2 N 0.718
sltm Xenopus tropicalis ENSXETG00000010840 N 0.718