CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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TMEM63A
(
Myotis lucifugus
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSMLUG00000016338
T38780_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMLUP00000014894
RRM
230
266
LFITGLPRHATKDAVESHFRDAYPTCEVVEVQLCYNV
ENSMLUP00000014894
RRM
338
378
EESRVQFQPLGMAFVTFQEKSMAIYILKDFNACKCQGLRCR
Links
Other
RRM
family RBPs
Other
Myotis lucifugus
RBPs
24 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
AGR010C
Ashbya gossypii
AGR010C
I
0.000
CAGL0D06182g
Candida glabrata
CAGL0D06182g
I
0.000
KLTH0D04158g
Kluyveromyces thermotolerans
KLTH0D04158g
I
0.000
Kwal_7522
Kluyveromyces waltii
Kwal_7522
I
0.000
SAKL0H23298g
Lachancea kluyveri
SAKL0H23298g
I
0.000
8821_YGL044C
Saccharomyces bayanus
8821_YGL044C
I
0.000
Scas_Contig621.16
Saccharomyces castellii
Scas_Contig621.16
I
0.000
Rna15
Saccharomyces cerevisiae
YGL044C
D
0.000
7766_YGL044C
Saccharomyces mikatae
7766_YGL044C
I
0.000
8520_YGL044C
Saccharomyces paradoxus
8520_YGL044C
I
0.000
ZYRO0G07216g
Zygosaccharomyces rouxii
ZYRO0G07216g
I
0.000