RBM39 (Vicugna pacos)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSVPAG00000003819 T42727_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSVPAP00000003546 RRM 155 223
ENSVPAP00000003546 RRM 252 322

Links

Other RRM family RBPs
Other Vicugna pacos RBPs

37 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Ame_R014613 Ailuropoda melanoleuca Ame_R014613 N 0.871
RBM23 Anolis carolinensis ENSACAG00000001569 N 0.829
BGIBMGA006208 Bombyx mori BGIBMGA006208 N 0.764
Q0IIK8_BOVIN Bos taurus ENSBTAG00000038333 N 0.864
RBM23 Callithrix jacchus ENSCJAG00000008482 N 0.857
B0KWM7_CALJA Callithrix jacchus ENSCJAG00000017535 N 0.993
RBM23 Canis familiaris ENSCAFG00000011217 N 0.871
RBM23 Choloepus hoffmanni ENSCHOG00000004460 N 0.700
ENSDORG00000004926 Dipodomys ordii ENSDORG00000004926 N 0.864
LOC100052786 Equus caballus ENSECAG00000009910 N 0.871
RBM23 Erinaceus europaeus ENSEEUG00000015560 N 0.843
RBM39 Erinaceus europaeus ENSEEUG00000004390 N 0.993
RBM23 Felis catus ENSFCAG00000006632 N 0.714
RBM23 Gorilla gorilla ENSGGOG00000015707 N 0.871
RBM39 Homo sapiens ENSG00000131051 N 0.993
RBM23 Homo sapiens ENSG00000100461 N 0.871
RBM23 Loxodonta africana ENSLAFG00000018567 N 0.850
LOC710066 Macaca mulatta ENSMMUG00000018381 N 0.871
RBM23 Microcebus murinus ENSMICG00000006364 N 0.864
RBM23 Monodelphis domestica ENSMODG00000024448 N 0.850
Rbm39 Mus musculus ENSMUSG00000027620 N 0.993
RBM23 Myotis lucifugus ENSMLUG00000012923 N 0.843
RBM23 Ochotona princeps ENSOPRG00000001092 N 0.844
RBM39 Ochotona princeps ENSOPRG00000002183 N 0.993
RBM23 Oryctolagus cuniculus ENSOCUG00000002006 N 0.851
RBM23 Oryzias latipes ENSORLG00000010370 N 0.893
RBM23 Pan troglodytes ENSPTRG00000006151 N 0.864
ENSPPYG00000005649 Pongo pygmaeus ENSPPYG00000005649 N 0.871
RBM23 Pteropus vampyrus ENSPVAG00000013785 N 0.864
RBM23 Sorex araneus ENSSARG00000005165 N 0.843
RBM23 Spermophilus tridecemlineatus ENSSTOG00000010354 N 0.750
RBM23 Takifugu rubripes ENSTRUG00000011352 N 0.893
RBM23 Tarsius syrichta ENSTSYG00000014755 N 0.714
RBM23 Tursiops truncatus ENSTTRG00000001500 N 0.871
RBM23 Vicugna pacos ENSVPAG00000000599 N 0.700
AAH73374 Xenopus laevis AAH73374 N 0.821
rbm23 Xenopus tropicalis ENSXETG00000022623 N 0.850