ENSXETG00000027221 (Xenopus tropicalis)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSXETG00000027221 T42966_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSXETP00000056914 RRM 13 83
ENSXETP00000056914 RRM 101 168

Links

Other RRM family RBPs
Other Xenopus tropicalis RBPs

26 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ENSACAG00000016470 Anolis carolinensis ENSACAG00000016470 I 0.000
AGAP011092 Anopheles gambiae AGAP011092 I 0.000
LOC100413032 Callithrix jacchus ENSCJAG00000015833 I 0.000
ENSCAFG00000000567 Canis familiaris ENSCAFG00000000567 I 0.000
estExt_Genewise1.C_1790010 Capitella teleta estExt_Genewise1.C_1790010 I 0.000
PABPC3 Gasterosteus aculeatus ENSGACG00000003572 I 0.000
185682 Helobdella robusta 185682 I 0.000
PABPC1 Homo sapiens ENSG00000070756 D 0.000
ISCW014211 Ixodes scapularis ISCW014211 I 0.000
ENSLAFG00000013994 Loxodonta africana ENSLAFG00000013994 I 0.000
PABPC1 Macaca mulatta ENSMMUG00000017786 I 0.000
XR_030308.1 Monodelphis domestica ENSMODG00000006222 I 0.000
Pabpc1 Mus musculus ENSMUSG00000022283 I 0.000
ENSOPRG00000009667 Ochotona princeps ENSOPRG00000009667 I 0.000
ENSOANG00000007307 Ornithorhynchus anatinus ENSOANG00000007307 I 0.000
ENSOCUG00000023935 Oryctolagus cuniculus ENSOCUG00000023935 I 0.000
ENSOCUG00000004354 Oryctolagus cuniculus ENSOCUG00000004354 I 0.000
PABPC3 Oryzias latipes ENSORLG00000002691 I 0.000
XR_023909.1 Pan troglodytes ENSPTRG00000020475 I 0.000
PHUM617090 Pediculus humanus PHUM617090 I 0.000
ENSPPYG00000018790 Pongo pygmaeus ENSPPYG00000018790 I 0.000
ENSPVAG00000016640 Pteropus vampyrus ENSPVAG00000016640 I 0.000
Pabpc1 Rattus norvegicus ENSRNOG00000008639 I 0.000
ENSSSCG00000006063 Sus scrofa ENSSSCG00000006063 I 0.000
PABPC1 Taeniopygia guttata ENSTGUG00000012067 I 0.000
PABPC3 Takifugu rubripes ENSTRUG00000011577 I 0.000
ENSTTRG00000004689 Tursiops truncatus ENSTTRG00000004689 I 0.000
pabpc1 Xenopus tropicalis ENSXETG00000006635 I 0.000