AGAP011092 (Anopheles gambiae)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 AGAP011092 T32556_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
pAbp
M130_0.6 		Drosophila melanogaster GAAAAHV RNAcompete
Ray et al.(2013)
RNCMPT00139 		0.773
PABPC1
M275_0.6 		Homo sapiens AAAAA SELEX
Cook et al.(2011)
24_7908267 		0.750
PABPC1
M146_0.6 		Homo sapiens ARAAAAM RNAcompete
Ray et al.(2013)
RNCMPT00155 		0.750
PABPC1
M349_0.6 		Homo sapiens ACDAAYM SELEX
Cook et al.(2011)
950_7908267 		0.750
PABPC4
M042_0.6 		Homo sapiens AAAAAAR RNAcompete
Ray et al.(2013)
RNCMPT00043 		0.746
PABPC3
M144_0.6 		Homo sapiens RAAAACM RNAcompete
Ray et al.(2013)
RNCMPT00153 		0.704
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
AGAP011092-PA RRM 4 74
AGAP011092-PA RRM 92 161
AGAP011092-PA RRM 185 253
AGAP011092-PA RRM 288 356

Links

Other RRM family RBPs
Other Anopheles gambiae RBPs

139 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
CpipJ_CPIJ007980 Culex pipiens CpipJ_CPIJ007980 I 0.889
AAEL010318 Aedes aegypti AAEL010318 I 0.889
CPIJ007980 Culex quinquefasciatus CPIJ007980 I 0.889
amel4_ncbi_hmm1364 Apis mellifera amel4_ncbi_hmm1364 I 0.854
amel4_ncbi_hmm1700 Apis mellifera amel4_ncbi_hmm1700 I 0.854
amel4_ncbi_hmm2036 Apis mellifera amel4_ncbi_hmm2036 I 0.854
BGIBMGA003469 Bombyx mori BGIBMGA003469 I 0.847
nasonia_NCBI_hmm386743 Nasonia vitripennis nasonia_NCBI_hmm386743 I 0.843
nasonia_NCBI_hmm394743 Nasonia vitripennis nasonia_NCBI_hmm394743 I 0.843
nasonia_NCBI_hmm390743 Nasonia vitripennis nasonia_NCBI_hmm390743 I 0.843
PHUM617090 Pediculus humanus PHUM617090 I 0.826
GI18654 Drosophila mojavensis FBgn0141393 I 0.801
GK19652 Drosophila willistoni FBgn0221650 I 0.801
GJ21671 Drosophila virilis FBgn0208790 I 0.791
GE11925 Drosophila yakuba FBgn0229707 I 0.790
DGIL_AUG5s5076g2t1 Acyrtosiphon pisum DGIL_AUG5s5076g2t1 I 0.789
GL11548 Drosophila persimilis FBgn0149157 I 0.787
GH21052 Drosophila grimshawi FBgn0128514 I 0.784
GA18673-RA Drosophila pseudoobscura FBgn0078673 I 0.784
GM21847 Drosophila sechellia FBgn0176724 I 0.783
GG21846 Drosophila erecta FBgn0114024 I 0.783
pAbp Drosophila melanogaster FBgn0261619 D 0.783
GF12652 Drosophila ananassae FBgn0089688 I 0.780
GD11341 Drosophila simulans FBgn0183090 I 0.780
ISCW014211 Ixodes scapularis ISCW014211 I 0.773
ENSGACG00000003771 Gasterosteus aculeatus ENSGACG00000003771 I 0.767
ENSTNIG00000009153 Tetraodon nigroviridis ENSTNIG00000009153 I 0.763
ENSTRUG00000003767 Takifugu rubripes ENSTRUG00000003767 I 0.763
DGIL_AUG5s1591g1t1 Acyrtosiphon pisum DGIL_AUG5s1591g1t1 I 0.761
PABPC4 Ochotona princeps ENSOPRG00000011984 I 0.760
PABPC4 Oryctolagus cuniculus ENSOCUG00000000562 I 0.760
D4AC21_RAT Rattus norvegicus ENSRNOG00000015642 I 0.760
DGIL_AUG5s9152g1t1 Acyrtosiphon pisum DGIL_AUG5s9152g1t1 I 0.757
ENSOCUG00000023935 Oryctolagus cuniculus ENSOCUG00000023935 I 0.756
ENSOCUG00000004354 Oryctolagus cuniculus ENSOCUG00000004354 I 0.756
ENSOPRG00000009667 Ochotona princeps ENSOPRG00000009667 I 0.756
ENSPPYG00000018790 Pongo pygmaeus ENSPPYG00000018790 I 0.756
ENSPVAG00000016640 Pteropus vampyrus ENSPVAG00000016640 I 0.756
ENSSSCG00000006063 Sus scrofa ENSSSCG00000006063 I 0.756
ENSTTRG00000004689 Tursiops truncatus ENSTTRG00000004689 I 0.756
PABPC4 Sus scrofa ENSSSCG00000003660 I 0.756
LOC100413032 Callithrix jacchus ENSCJAG00000015833 I 0.756
A4IFC3_BOVIN Bos taurus ENSBTAG00000017125 I 0.756
PABPC4 Canis familiaris ENSCAFG00000003081 I 0.756
PABPC1 Macaca mulatta ENSMMUG00000017786 I 0.756
LOC100054235 Equus caballus ENSECAG00000009396 I 0.756
ENSMICG00000000431 Microcebus murinus ENSMICG00000000431 I 0.756
PABPC1 Homo sapiens ENSG00000070756 D 0.756
ENSCAFG00000000567 Canis familiaris ENSCAFG00000000567 I 0.756
PABPC4 Loxodonta africana ENSLAFG00000000151 I 0.756
ENSLAFG00000013994 Loxodonta africana ENSLAFG00000013994 I 0.756
PABPC3 Gasterosteus aculeatus ENSGACG00000003572 I 0.756
pabpc1b Danio rerio ENSDARG00000021140 I 0.754
PABPC4 Pan troglodytes ENSPTRG00000000573 I 0.753
PABPC4 Gorilla gorilla ENSGGOG00000004002 I 0.753
Pabpc1 Rattus norvegicus ENSRNOG00000008639 I 0.753
A6MKJ4_CALJA Callithrix jacchus ENSCJAG00000002512 I 0.753
PABPC4 Homo sapiens ENSG00000090621 D 0.753
PABPC4 Cavia porcellus ENSCPOG00000009552 I 0.753
PABPC1 Taeniopygia guttata ENSTGUG00000012067 I 0.753
XR_023909.1 Pan troglodytes ENSPTRG00000020475 I 0.753
ENSOANG00000007307 Ornithorhynchus anatinus ENSOANG00000007307 I 0.753
PABPC4 Macaca mulatta ENSMMUG00000007497 I 0.753
ENSACAG00000016470 Anolis carolinensis ENSACAG00000016470 I 0.753
Pabpc1 Mus musculus ENSMUSG00000022283 I 0.753
ENSOANG00000010001 Ornithorhynchus anatinus ENSOANG00000010001 I 0.753
AAH73435 Xenopus laevis AAH73435 I 0.753
ENSPPYG00000001506 Pongo pygmaeus ENSPPYG00000001506 I 0.753
PABPC4 Oryzias latipes ENSORLG00000017479 I 0.753
BDE_estExt_fgenesh1_pg.C_380037 Daphnia pulex BDE_estExt_fgenesh1_pg.C_380037 I 0.752
estExt_Genewise1.C_1790010 Capitella teleta estExt_Genewise1.C_1790010 I 0.751
XM_001365232.1 Monodelphis domestica ENSMODG00000017657 I 0.750
pabpc4 Danio rerio ENSDARG00000059259 I 0.749
PABPC4 Gallus gallus ENSGALG00000003800 I 0.749
PABPC3 Takifugu rubripes ENSTRUG00000011577 I 0.749
PABPC4 Erinaceus europaeus ENSEEUG00000002962 I 0.749
PABPC4 Taeniopygia guttata ENSTGUG00000001266 I 0.749
pabpc1a Danio rerio ENSDARG00000017219 I 0.749
XR_030308.1 Monodelphis domestica ENSMODG00000006222 I 0.749
CAA40721 Xenopus laevis CAA40721 I 0.746
P20965 Xenopus laevis P20965 I 0.746
pabpc1 Xenopus tropicalis ENSXETG00000006635 I 0.746
PABPC4 Tetraodon nigroviridis ENSTNIG00000016902 I 0.746
AAH52100 Xenopus laevis AAH52100 I 0.746
Gm10110 Mus musculus ENSMUSG00000062093 I 0.746
Q8QGJ7_FUGRU Takifugu rubripes ENSTRUG00000005907 I 0.746
PABPC3 Oryzias latipes ENSORLG00000002691 I 0.746
LOAG_01058 Loa loa LOAG_01058 I 0.745
Bm1_16080 Brugia malayi Bm1_16080 I 0.745
Bm1_06880 Brugia malayi Bm1_06880 I 0.745
Pabpc4 Mus musculus ENSMUSG00000011257 I 0.742
PABPC4 Gasterosteus aculeatus ENSGACG00000007179 I 0.742
AAA60936 Xenopus laevis AAA60936 I 0.742
ENSTSYG00000004229 Tarsius syrichta ENSTSYG00000004229 I 0.739
LOC100411130 Callithrix jacchus ENSCJAG00000018953 I 0.739
D3ZEY8_RAT Rattus norvegicus ENSRNOG00000028592 I 0.739
Ame_R001741 Ailuropoda melanoleuca Ame_R001741 I 0.739
Q6IP09 Xenopus laevis Q6IP09 I 0.735
AAH72110 Xenopus laevis AAH72110 I 0.735
AAI08463 Xenopus laevis AAI08463 I 0.735
gw.1.65.1 Branchiostoma floridae gw.1.65.1 I 0.733
e_gw.313.40.1 Branchiostoma floridae e_gw.313.40.1 I 0.733
ENSORLG00000003008 Oryzias latipes ENSORLG00000003008 I 0.731
ENSPPYG00000005219 Pongo pygmaeus ENSPPYG00000005219 I 0.731
XP_002156904.1 Hydra magnipapillata XP_002156904.1 I 0.730
XP_002156940.1 Hydra magnipapillata XP_002156940.1 I 0.730
fgenesh1_pm.scaffold_278000002 Nematostella vectensis fgenesh1_pm.scaffold_278000002 I 0.730
e_gw1.115.135.1 Lottia gigantea e_gw1.115.135.1 I 0.730
ENSCING00000002796 Ciona intestinalis ENSCING00000002796 I 0.729
PABPC1L Takifugu rubripes ENSTRUG00000011085 I 0.728
ENSMICG00000016633 Microcebus murinus ENSMICG00000016633 I 0.728
XP_001177907.1 Strongylocentrotus purpuratus XP_001177907.1 I 0.726
XP_801795.2 Strongylocentrotus purpuratus XP_801795.2 I 0.726
Pabpc2 Mus musculus ENSMUSG00000051732 I 0.724
ENSCSAVG00000004246 Ciona savignyi ENSCSAVG00000004246 I 0.722
PABPC1L Gasterosteus aculeatus ENSGACG00000002792 I 0.721
PABPC3 Macaca mulatta ENSMMUG00000020835 I 0.721
XM_001367383.1 Monodelphis domestica ENSMODG00000017105 I 0.721
PABPC3 Tetraodon nigroviridis ENSTNIG00000013307 I 0.720
Pabpc2 Rattus norvegicus ENSRNOG00000014527 I 0.717
Q2VIP2_PANTR Pan troglodytes ENSPTRG00000022593 I 0.717
pabpc1l Danio rerio ENSDARG00000002597 I 0.714
PABPC1L Anolis carolinensis ENSACAG00000011841 I 0.714
estExt_Genewise1.C_sca_1150143 Lottia gigantea estExt_Genewise1.C_sca_1150143 I 0.712
PABPC1L Meleagris gallopavo ENSMGAG00000003674 I 0.710
185682 Helobdella robusta 185682 I 0.708
PABPC1L Sus scrofa ENSSSCG00000007382 I 0.707
PABPC1L Gallus gallus ENSGALG00000004123 I 0.707
Pabpc6 Mus musculus ENSMUSG00000046173 I 0.707
PABPC3 Homo sapiens ENSG00000151846 D 0.707
Pabpc3 Rattus norvegicus ENSRNOG00000017367 I 0.707
ENSCSAVG00000003102 Ciona savignyi ENSCSAVG00000003102 I 0.706
CBG07431 Caenorhabditis briggsae CBG07431 N 0.706
69344 Helobdella robusta 69344 I 0.705
AAK29408 Xenopus laevis AAK29408 I 0.703
AAH80020 Xenopus laevis AAH80020 I 0.703
PABPC1L Monodelphis domestica ENSMODG00000016198 I 0.703
Q98SP8 Xenopus laevis Q98SP8 I 0.703
PABPC1L Taeniopygia guttata ENSTGUG00000005114 I 0.702