GSVIVG00034558001 (Vitis vinifera)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 GSVIVG00034558001 T44777_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
GSVIVT00034558001 RRM 8 67
GSVIVT00034558001 RRM 103 169
GSVIVT00034558001 RRM 258 324
GSVIVT00034558001 RRM 368 434

Links

Other RRM family RBPs
Other Vitis vinifera RBPs

29 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
XM_002893897.1 Arabidopsis lyrata Al_scaffold_0001_3801 N 0.823
PTB3 Arabidopsis thaliana AT1G43190-TAIR-G N 0.824
BRADI2G24150 Brachypodium distachyon BRADI2G24150 N 0.732
BRADI2G56120 Brachypodium distachyon BRADI2G56120 N 0.722
PK14373.1 Cannabis sativa PK14373.1 N 0.885
Cucsa.365870 Cucumis sativus Cucsa.365870 N 0.862
Glyma02g08870.1 Glycine max Glyma02g08870.1 N 0.885
Glyma20g30820.1 Glycine max Glyma20g30820.1 N 0.882
Glyma10g36770.1 Glycine max Glyma10g36770.1 N 0.866
chr5.CM0052.230.nd Lotus japonicus chr5.CM0052.230.nd N 0.841
MDP0000043338 Malus x domestica MDP0000043338 N 0.713
cassava19040.valid.m1 Manihot esculenta cassava19040.valid.m1 N 0.883
cassava19039.valid.m1 Manihot esculenta cassava19039.valid.m1 N 0.883
cassava19038.valid.m1 Manihot esculenta cassava19038.valid.m1 N 0.883
cassava19037.valid.m1 Manihot esculenta cassava19037.valid.m1 N 0.883
cassava12743.valid.m1 Manihot esculenta cassava12743.valid.m1 N 0.868
Medtr1g124970 Medicago truncatula Medtr1g124970 N 0.840
mgf010164m Mimulus guttatus mgf010164m N 0.887
LOC_Os01g64770 Oryza sativa LOC_Os01g64770 N 0.721
LOC_Os05g36120 Oryza sativa LOC_Os05g36120 N 0.718
PDK_20s1358001g002 Phoenix dactylifera PDK_20s1358001g002 N 0.827
e_gw1.48.34.1 Physcomitrella patens e_gw1.48.34.1 N 0.732
B9H7U5_POPTR Populus trichocarpa POPTR_0005s21660 N 0.865
B9GT89_POPTR Populus trichocarpa POPTR_0002s06660 N 0.837
ppa005775m Prunus persica ppa005775m N 0.874
29863.m001059 Ricinus communis 29863.m001059 N 0.864
SB09G021560 Sorghum bicolor Sb09g021560 N 0.728
GRMZM2G052926 Zea mays GRMZM2G052926 N 0.716
GRMZM2G070113 Zea mays GRMZM2G070113 N 0.728