mgf019210m (Mimulus guttatus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 mgf019210m T53773_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
mgf019210m RRM 119 187
mgf019210m RRM 224 293

Links

Other RRM family RBPs
Other Mimulus guttatus RBPs

32 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
XM_002879859.1 Arabidopsis lyrata scaffold_402914.1 N 0.734
XM_002878068.1 Arabidopsis lyrata fgenesh2_kg.5__2117__AT3G56860.3 N 0.763
AT2G41060 Arabidopsis thaliana AT2G41060-TAIR-G N 0.719
UBA2A Arabidopsis thaliana AT3G56860-TAIR-G N 0.755
PK27017.1 Cannabis sativa PK27017.1 N 0.727
Cucsa.250370 Cucumis sativus Cucsa.250370 N 0.727
Glyma14g04480.1 Glycine max Glyma14g04480.1 N 0.729
Glyma02g44330.1 Glycine max Glyma02g44330.1 N 0.729
Glyma03g27290.1 Glycine max Glyma03g27290.1 N 0.719
Glyma19g30250.1 Glycine max Glyma19g30250.1 N 0.734
MDP0000792725 Malus x domestica MDP0000792725 N 0.734
MDP0000218409 Malus x domestica MDP0000218409 N 0.755
MDP0000905699 Malus x domestica MDP0000905699 N 0.755
MDP0000381936 Malus x domestica MDP0000381936 N 0.734
cassava8977.m1 Manihot esculenta cassava8977.m1 N 0.727
cassava6906.valid.m1 Manihot esculenta cassava6906.valid.m1 N 0.705
cassava22358.valid.m1 Manihot esculenta cassava22358.valid.m1 N 0.734
cassava22357.valid.m1 Manihot esculenta cassava22357.valid.m1 N 0.734
cassava22355.valid.m1 Manihot esculenta cassava22355.valid.m1 N 0.741
cassava22354.valid.m1 Manihot esculenta cassava22354.valid.m1 N 0.741
cassava22353.valid.m1 Manihot esculenta cassava22353.valid.m1 N 0.741
Medtr7g104960 Medicago truncatula Medtr7g104960 N 0.727
mgf012484m Mimulus guttatus mgf012484m N 0.871
mgf005672m Mimulus guttatus mgf005672m N 0.871
mgf002509m Mimulus guttatus mgf002509m N 0.871
B9IHG4_POPTR Populus trichocarpa POPTR_0016s02440 N 0.734
B9HDH2_POPTR Populus trichocarpa POPTR_0006s02650 N 0.719
ppa004648m Prunus persica ppa004648m N 0.748
30099.m001684 Ricinus communis 30099.m001684 N 0.741
30006.m000276 Ricinus communis 30006.m000276 N 0.763
GSVIVG00037491001 Vitis vinifera GSVIVG00037491001 N 0.784
GRMZM2G132465 Zea mays GRMZM2G132465 N 0.712