GRMZM2G132465 (Zea mays)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 GRMZM2G132465 T54140_0.6 MaizeSequence (2009-Oct-16)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
GRMZM2G132465_P01 RRM 127 195
GRMZM2G132465_P01 RRM 233 301
GRMZM2G132465_P02 RRM 127 195
GRMZM2G132465_P02 RRM 233 301
GRMZM2G132465_P03 RRM 127 195
GRMZM2G132465_P03 RRM 233 301
GRMZM2G132465_P04 RRM 127 195
GRMZM2G132465_P04 RRM 233 301
GRMZM2G132465_P05 RRM 127 195
GRMZM2G132465_P05 RRM 233 301

Links

Other RRM family RBPs
Other Zea mays RBPs

37 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
SB03G010380 Sorghum bicolor Sb03g010380 N 0.935
BGIOSIBCE001249 Oryza indica BGIOSIBCE001249 N 0.850
LOC_Os01g16090 Oryza sativa LOC_Os01g16090 N 0.850
BRADI2G09820 Brachypodium distachyon BRADI2G09820 N 0.836
GSVIVG00037491001 Vitis vinifera GSVIVG00037491001 N 0.770
cassava22353.valid.m1 Manihot esculenta cassava22353.valid.m1 N 0.770
cassava22354.valid.m1 Manihot esculenta cassava22354.valid.m1 N 0.770
cassava22355.valid.m1 Manihot esculenta cassava22355.valid.m1 N 0.770
cassava8977.m1 Manihot esculenta cassava8977.m1 N 0.763
B9HDH2_POPTR Populus trichocarpa POPTR_0006s02650 N 0.763
Glyma19g30250.1 Glycine max Glyma19g30250.1 N 0.755
Glyma03g27290.1 Glycine max Glyma03g27290.1 N 0.755
30099.m001684 Ricinus communis 30099.m001684 N 0.755
cassava22357.valid.m1 Manihot esculenta cassava22357.valid.m1 N 0.748
XM_002879859.1 Arabidopsis lyrata scaffold_402914.1 N 0.748
30006.m000276 Ricinus communis 30006.m000276 N 0.748
Medtr7g104960 Medicago truncatula Medtr7g104960 N 0.748
B9IHG4_POPTR Populus trichocarpa POPTR_0016s02440 N 0.748
cassava22358.valid.m1 Manihot esculenta cassava22358.valid.m1 N 0.748
Cucsa.250370 Cucumis sativus Cucsa.250370 N 0.748
Glyma14g04480.1 Glycine max Glyma14g04480.1 N 0.743
cassava6906.valid.m1 Manihot esculenta cassava6906.valid.m1 N 0.741
UBA2A Arabidopsis thaliana AT3G56860-TAIR-G N 0.741
MDP0000218409 Malus x domestica MDP0000218409 N 0.741
XM_002878068.1 Arabidopsis lyrata fgenesh2_kg.5__2117__AT3G56860.3 N 0.741
ppa004648m Prunus persica ppa004648m N 0.741
MDP0000905699 Malus x domestica MDP0000905699 N 0.741
AT2G41060 Arabidopsis thaliana AT2G41060-TAIR-G N 0.741
Glyma02g44330.1 Glycine max Glyma02g44330.1 N 0.729
MDP0000792725 Malus x domestica MDP0000792725 N 0.727
MDP0000381936 Malus x domestica MDP0000381936 N 0.727
Medtr5g095270 Medicago truncatula Medtr5g095270 N 0.721
mgf019210m Mimulus guttatus mgf019210m N 0.712
PK27017.1 Cannabis sativa PK27017.1 N 0.712
chr2.CM0031.350.nc Lotus japonicus chr2.CM0031.350.nc N 0.707
PK11606.1 Cannabis sativa PK11606.1 N 0.707