mgf002509m (Mimulus guttatus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 mgf002509m T53594_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
mgf002509m RRM 160 228
mgf002509m RRM 262 331

Links

Other RRM family RBPs
Other Mimulus guttatus RBPs

35 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
mgf012484m Mimulus guttatus mgf012484m N 1.000
mgf005672m Mimulus guttatus mgf005672m N 1.000
mgf019210m Mimulus guttatus mgf019210m N 0.871
XM_002879859.1 Arabidopsis lyrata scaffold_402914.1 N 0.770
MDP0000218409 Malus x domestica MDP0000218409 N 0.770
ppa004648m Prunus persica ppa004648m N 0.770
MDP0000905699 Malus x domestica MDP0000905699 N 0.770
30099.m001684 Ricinus communis 30099.m001684 N 0.763
Cucsa.250370 Cucumis sativus Cucsa.250370 N 0.763
AT2G41060 Arabidopsis thaliana AT2G41060-TAIR-G N 0.763
GSVIVG00037491001 Vitis vinifera GSVIVG00037491001 N 0.763
30006.m000276 Ricinus communis 30006.m000276 N 0.755
B9HDH2_POPTR Populus trichocarpa POPTR_0006s02650 N 0.748
B9IHG4_POPTR Populus trichocarpa POPTR_0016s02440 N 0.748
MDP0000381936 Malus x domestica MDP0000381936 N 0.748
MDP0000792725 Malus x domestica MDP0000792725 N 0.748
cassava22354.valid.m1 Manihot esculenta cassava22354.valid.m1 N 0.748
cassava22353.valid.m1 Manihot esculenta cassava22353.valid.m1 N 0.748
Glyma19g30250.1 Glycine max Glyma19g30250.1 N 0.748
cassava22355.valid.m1 Manihot esculenta cassava22355.valid.m1 N 0.748
Glyma02g44330.1 Glycine max Glyma02g44330.1 N 0.743
cassava8977.m1 Manihot esculenta cassava8977.m1 N 0.741
PK27017.1 Cannabis sativa PK27017.1 N 0.741
Glyma03g27290.1 Glycine max Glyma03g27290.1 N 0.734
UBA2A Arabidopsis thaliana AT3G56860-TAIR-G N 0.734
XM_002878068.1 Arabidopsis lyrata fgenesh2_kg.5__2117__AT3G56860.3 N 0.734
Medtr5g095270 Medicago truncatula Medtr5g095270 N 0.729
Glyma14g04480.1 Glycine max Glyma14g04480.1 N 0.729
cassava22357.valid.m1 Manihot esculenta cassava22357.valid.m1 N 0.727
cassava22358.valid.m1 Manihot esculenta cassava22358.valid.m1 N 0.727
cassava6906.valid.m1 Manihot esculenta cassava6906.valid.m1 N 0.727
chr2.CM0031.350.nc Lotus japonicus chr2.CM0031.350.nc N 0.721
PK11606.1 Cannabis sativa PK11606.1 N 0.721
LOC_Os01g16090 Oryza sativa LOC_Os01g16090 N 0.700
BGIOSIBCE001249 Oryza indica BGIOSIBCE001249 N 0.700