CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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XM_001381689.1
(
Monodelphis domestica
)
S1
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00575 (S1)
IPR003029
ENSMODG00000020372
T60447_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMODP00000025481
S1
16
86
YTIFRGEVVTVTEYGAFIKIPGCRKQGLVHRPHMSSCQVDKPSEIVDAGDKVWVKLIGREMNKGKLSLSMN
Links
Other
S1
family RBPs
Other
Monodelphis domestica
RBPs
30 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
A5D7H7_BOVIN
Bos taurus
ENSBTAG00000010235
N
0.000
LOC100396802
Callithrix jacchus
ENSCJAG00000006675
N
0.000
C14orf21
Cavia porcellus
ENSCPOG00000014406
N
0.000
LOC100054451
Equus caballus
ENSECAG00000024171
N
0.000
C14orf21
Homo sapiens
ENSG00000196943
N
0.000
C14orf21
Loxodonta africana
ENSLAFG00000028287
N
0.000
C14orf21
Oryctolagus cuniculus
ENSOCUG00000002948
N
0.000
C14orf21
Pan troglodytes
ENSPTRG00000033813
N
0.000
C14orf21
Procavia capensis
ENSPCAG00000002545
N
0.000
RGD1308396
Rattus norvegicus
ENSRNOG00000020321
N
0.000
C14orf21
Sus scrofa
ENSSSCG00000001990
N
0.000