CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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A5D7H7_BOVIN
(
Bos taurus
)
PUF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00806 (PUF)
IPR001313
ENSBTAG00000010235
T24158_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSBTAP00000044409
PUF
201
225
YCGDTHGSFVVRTLLQVLGGTLLES
ENSBTAP00000044409
PUF
324
352
LLFLRDQTSSRLLEQVLLVSEPPRLQSLF
ENSBTAP00000044409
PUF
356
390
LQGHLQALAAHSIANFPLQRFLDAITTPELLSPVF
ENSBTAP00000044409
PUF
514
548
TGPQLLTLAQSPAGSHVLDAVLTSPSVTRKQRRRV
ENSBTAP00000044409
PUF
551
574
TLKGHYVTLACSRHGSRVLDAIWS
Links
Other
PUF
family RBPs
Other
Bos taurus
RBPs
11 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
C14orf21
Sus scrofa
ENSSSCG00000001990
N
0.919
LOC100054451
Equus caballus
ENSECAG00000024171
N
0.912
C14orf21
Oryctolagus cuniculus
ENSOCUG00000002948
N
0.905
C14orf21
Loxodonta africana
ENSLAFG00000028287
N
0.899
LOC100396802
Callithrix jacchus
ENSCJAG00000006675
N
0.878
RGD1308396
Rattus norvegicus
ENSRNOG00000020321
N
0.858
C14orf21
Procavia capensis
ENSPCAG00000002545
N
0.854
C14orf21
Cavia porcellus
ENSCPOG00000014406
N
0.851
C14orf21
Homo sapiens
ENSG00000196943
N
0.847
C14orf21
Pan troglodytes
ENSPTRG00000033813
N
0.847
ENSPPYG00000005698
Pongo pygmaeus
ENSPPYG00000005698
N
0.847