RGD1308396 (Rattus norvegicus)
PUF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00806 (PUF) IPR001313 ENSRNOG00000020321 T24265_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSRNOP00000027604 PUF 195 219
ENSRNOP00000027604 PUF 318 346
ENSRNOP00000027604 PUF 350 384
ENSRNOP00000027604 PUF 508 542
ENSRNOP00000027604 PUF 545 567

Links

Other PUF family RBPs
Other Rattus norvegicus RBPs

11 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
C14orf21 Loxodonta africana ENSLAFG00000028287 N 0.872
C14orf21 Oryctolagus cuniculus ENSOCUG00000002948 N 0.865
LOC100054451 Equus caballus ENSECAG00000024171 N 0.858
A5D7H7_BOVIN Bos taurus ENSBTAG00000010235 N 0.858
LOC100396802 Callithrix jacchus ENSCJAG00000006675 N 0.858
C14orf21 Sus scrofa ENSSSCG00000001990 N 0.851
C14orf21 Cavia porcellus ENSCPOG00000014406 N 0.824
C14orf21 Pan troglodytes ENSPTRG00000033813 N 0.822
ENSPPYG00000005698 Pongo pygmaeus ENSPPYG00000005698 N 0.822
C14orf21 Homo sapiens ENSG00000196943 N 0.822
C14orf21 Procavia capensis ENSPCAG00000002545 N 0.821