CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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C14orf21
(
Procavia capensis
)
PUF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00806 (PUF)
IPR001313
ENSPCAG00000002545
T24252_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSPCAP00000002398
PUF
193
220
FLFYCGDTYGSFAVRTLLQVLGGTLLES
ENSPCAP00000002398
PUF
320
348
LLFLRDQTSSRLLEQVLLVLEPPRLQKLF
ENSPCAP00000002398
PUF
352
386
FQGQLQTLAAHPIANFPLQRLLDAITTPDLLSPVF
ENSPCAP00000002398
PUF
512
544
SQLLALAQNPAGSHVLDAVLTSPSVTRKQRRRL
ENSPCAP00000002398
PUF
548
570
LKGQYVALACSRHGSRVLDAIWS
Links
Other
PUF
family RBPs
Other
Procavia capensis
RBPs
11 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
C14orf21
Loxodonta africana
ENSLAFG00000028287
N
0.934
LOC100396802
Callithrix jacchus
ENSCJAG00000006675
N
0.886
A5D7H7_BOVIN
Bos taurus
ENSBTAG00000010235
N
0.854
LOC100054451
Equus caballus
ENSECAG00000024171
N
0.854
C14orf21
Oryctolagus cuniculus
ENSOCUG00000002948
N
0.854
ENSPPYG00000005698
Pongo pygmaeus
ENSPPYG00000005698
N
0.854
C14orf21
Pan troglodytes
ENSPTRG00000033813
N
0.847
C14orf21
Homo sapiens
ENSG00000196943
N
0.847
C14orf21
Sus scrofa
ENSSSCG00000001990
N
0.841
RGD1308396
Rattus norvegicus
ENSRNOG00000020321
N
0.821
C14orf21
Cavia porcellus
ENSCPOG00000014406
N
0.808