CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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C14orf21
(
Sus scrofa
)
PUF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00806 (PUF)
IPR001313
ENSSSCG00000001990
T24269_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSSSCP00000002176
PUF
198
222
YCGDTHGSFVVRTLLQVLGGTLLDS
ENSSSCP00000002176
PUF
322
349
LFLRDQTSSRLLEQVLLVSEPARLQSLF
ENSSSCP00000002176
PUF
353
387
FQGHLQTLAAHPIANFPLQRFLDAITTTELLSPVF
ENSSSCP00000002176
PUF
511
545
TGPQLLTLAQSPAGSHVLDAVLASPAVTRKQRRRV
ENSSSCP00000002176
PUF
548
571
TLKGQYVALACSRHGSRVLDAIWN
Links
Other
PUF
family RBPs
Other
Sus scrofa
RBPs
11 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
A5D7H7_BOVIN
Bos taurus
ENSBTAG00000010235
N
0.919
LOC100054451
Equus caballus
ENSECAG00000024171
N
0.905
C14orf21
Oryctolagus cuniculus
ENSOCUG00000002948
N
0.885
C14orf21
Loxodonta africana
ENSLAFG00000028287
N
0.885
LOC100396802
Callithrix jacchus
ENSCJAG00000006675
N
0.865
RGD1308396
Rattus norvegicus
ENSRNOG00000020321
N
0.851
C14orf21
Procavia capensis
ENSPCAG00000002545
N
0.841
C14orf21
Cavia porcellus
ENSCPOG00000014406
N
0.838
C14orf21
Pan troglodytes
ENSPTRG00000033813
N
0.822
ENSPPYG00000005698
Pongo pygmaeus
ENSPPYG00000005698
N
0.822
C14orf21
Homo sapiens
ENSG00000196943
N
0.822