CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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C14orf21
(
Loxodonta africana
)
PUF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00806 (PUF)
IPR001313
ENSLAFG00000028287
T24212_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSLAFP00000022653
PUF
196
220
YCGDTYGSFVVRTLLQVLGGTLLES
ENSLAFP00000022653
PUF
319
347
LLFLRDQTSSRLLEQVLLVLEPPRLQNLF
ENSLAFP00000022653
PUF
351
385
FQGQLQTLAAHPIANFPLQRLLDAITTPDLLSSVF
ENSLAFP00000022653
PUF
509
543
TGPQLLALAQNPAGSHVLDAVLTSPSVTRKQRRRL
ENSLAFP00000022653
PUF
546
569
TLKGQYVALACSRHGSRVLDAIWS
Links
Other
PUF
family RBPs
Other
Loxodonta africana
RBPs
11 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
C14orf21
Procavia capensis
ENSPCAG00000002545
N
0.934
A5D7H7_BOVIN
Bos taurus
ENSBTAG00000010235
N
0.899
LOC100054451
Equus caballus
ENSECAG00000024171
N
0.899
C14orf21
Oryctolagus cuniculus
ENSOCUG00000002948
N
0.899
LOC100396802
Callithrix jacchus
ENSCJAG00000006675
N
0.892
C14orf21
Sus scrofa
ENSSSCG00000001990
N
0.885
RGD1308396
Rattus norvegicus
ENSRNOG00000020321
N
0.872
ENSPPYG00000005698
Pongo pygmaeus
ENSPPYG00000005698
N
0.860
C14orf21
Pan troglodytes
ENSPTRG00000033813
N
0.854
C14orf21
Homo sapiens
ENSG00000196943
N
0.854
C14orf21
Cavia porcellus
ENSCPOG00000014406
N
0.851