LOC100396802 (Callithrix jacchus)
PUF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00806 (PUF) IPR001313 ENSCJAG00000006675 T24170_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSCJAP00000012313 PUF 64 96
ENSCJAP00000012313 PUF 98 122
ENSCJAP00000012375 PUF 196 220
ENSCJAP00000012375 PUF 319 347
ENSCJAP00000012375 PUF 351 385
ENSCJAP00000012375 PUF 512 543
ENSCJAP00000012375 PUF 547 569

Links

Other PUF family RBPs
Other Callithrix jacchus RBPs

12 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
C14orf21 Oryctolagus cuniculus ENSOCUG00000002948 N 0.905
ENSPPYG00000005698 Pongo pygmaeus ENSPPYG00000005698 N 0.897
C14orf21 Loxodonta africana ENSLAFG00000028287 N 0.892
C14orf21 Homo sapiens ENSG00000196943 N 0.891
C14orf21 Pan troglodytes ENSPTRG00000033813 N 0.891
C14orf21 Procavia capensis ENSPCAG00000002545 N 0.886
A5D7H7_BOVIN Bos taurus ENSBTAG00000010235 N 0.878
LOC100054451 Equus caballus ENSECAG00000024171 N 0.878
C14orf21 Cavia porcellus ENSCPOG00000014406 N 0.878
C14orf21 Sus scrofa ENSSSCG00000001990 N 0.865
RGD1308396 Rattus norvegicus ENSRNOG00000020321 N 0.858
C14orf21 Tursiops truncatus ENSTTRG00000008637 N 0.836