CRE28738 (Caenorhabditis remanei)
CCCH ZF,RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH)
PF00076 (RRM_1) 		IPR000571
IPR000504 		CRE28738 T00435_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
CRE28738 CCCH ZF 21 47
CRE28738 RRM 89 150
CRE28738 CCCH ZF 159 184

Links

Other CCCH ZF,RRM family RBPs
Other Caenorhabditis remanei RBPs

50 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
uaf-2 Caenorhabditis elegans Y116A8C.35 N 1.000
CBG00419 Caenorhabditis briggsae CBG00419 N 1.000
CBN00865 Caenorhabditis brenneri CBN00865 N 1.000
LOAG_00486 Loa loa LOAG_00486 N 0.861
Bm1_55710 Brugia malayi Bm1_55710 N 0.843
WUBG_02195 Wuchereria bancrofti WUBG_02195 N 0.843
Ppa-uaf-2 Pristionchus pacificus PPA01467 N 0.821
Minc02944 Meloidogyne incognita Minc02944 N 0.817
U2AF1 Oryzias latipes ENSORLG00000006182 N 0.735
U2af1 Mus musculus ENSMUSG00000061613 N 0.735
U2AF1 Monodelphis domestica ENSMODG00000021029 N 0.735
U2AF1 Anolis carolinensis ENSACAG00000017836 N 0.735
U2AF1 Taeniopygia guttata ENSTGUG00000005826 N 0.735
U2AF1 Macaca mulatta ENSMMUG00000022769 N 0.735
U2AF1 Tarsius syrichta ENSTSYG00000006799 N 0.735
U2AF1 Tetraodon nigroviridis ENSTNIG00000008311 N 0.735
U2AF1 Pan troglodytes ENSPTRG00000013952 N 0.735
ENSORLG00000008857 Oryzias latipes ENSORLG00000008857 N 0.735
Q98TR0_CHICK Gallus gallus ENSGALG00000016198 N 0.735
U2AF1 Homo sapiens ENSG00000160201 N 0.735
ENSGACG00000003454 Gasterosteus aculeatus ENSGACG00000003454 N 0.735
U2AF1 Cavia porcellus ENSCPOG00000004893 N 0.735
U2AF1 Echinops telfairi ENSETEG00000002200 N 0.735
U2AF1 Microcebus murinus ENSMICG00000013835 N 0.735
U2AF1_BOVIN Bos taurus ENSBTAG00000011645 N 0.735
U2AF1 Loxodonta africana ENSLAFG00000011460 N 0.735
AAI08559 Xenopus laevis AAI08559 N 0.726
U2AF1 Gasterosteus aculeatus ENSGACG00000014605 N 0.726
u2af1 Danio rerio ENSDARG00000015325 N 0.726
ENSCSAVG00000000329 Ciona savignyi ENSCSAVG00000000329 N 0.718
e_gw.8.587.1 Branchiostoma floridae e_gw.8.587.1 N 0.718
e_gw.8.588.1 Branchiostoma floridae e_gw.8.588.1 N 0.718
LOC100415206 Callithrix jacchus ENSCJAG00000015843 N 0.718
ENSCING00000004086 Ciona intestinalis ENSCING00000004086 N 0.718
e_gw1.49.82.1 Lottia gigantea e_gw1.49.82.1 N 0.718
U2AF1 Canis familiaris ENSCAFG00000010572 N 0.709
Ame_R019749 Ailuropoda melanoleuca Ame_R019749 N 0.709
LOC100057570 Equus caballus ENSECAG00000015558 N 0.709
U2AF1 Tupaia belangeri ENSTBEG00000000453 N 0.709
U2AF1 Spermophilus tridecemlineatus ENSSTOG00000012766 N 0.709
U2AF1 Pteropus vampyrus ENSPVAG00000016992 N 0.709
U2AF1 Procavia capensis ENSPCAG00000013413 N 0.709
e_gw.121.26.1 Nematostella vectensis e_gw.121.26.1 N 0.709
U2AF1 Meleagris gallopavo ENSMGAG00000014587 N 0.709
U2af1 Dipodomys ordii ENSDORG00000000211 N 0.709
U2AF1 Vicugna pacos ENSVPAG00000002856 N 0.709
U2AF1 Myotis lucifugus ENSMLUG00000014756 N 0.709
U2AF1 Ornithorhynchus anatinus ENSOANG00000006463 N 0.709
XP_001191705.1 Strongylocentrotus purpuratus XP_001191705.1 N 0.703
U2AF1 Takifugu rubripes ENSTRUG00000013815 N 0.701