XP_001191705.1 (Strongylocentrotus purpuratus)
CCCH ZF,RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH)
PF00076 (RRM_1) 		IPR000571
IPR000504 		XP_001191705.1 T01141_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
XP_001191705.1 CCCH ZF 1 24
XP_001191705.1 RRM 65 127
XP_001191705.1 CCCH ZF 135 161

Links

Other CCCH ZF,RRM family RBPs
Other Strongylocentrotus purpuratus RBPs

99 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
U2AF1 Spermophilus tridecemlineatus ENSSTOG00000012766 N 0.904
U2AF1 Pteropus vampyrus ENSPVAG00000016992 N 0.904
U2af1 Dipodomys ordii ENSDORG00000000211 N 0.904
U2AF1 Myotis lucifugus ENSMLUG00000014756 N 0.904
U2AF1 Vicugna pacos ENSVPAG00000002856 N 0.904
U2AF1 Tupaia belangeri ENSTBEG00000000453 N 0.904
e_gw.8.587.1 Branchiostoma floridae e_gw.8.587.1 N 0.897
e_gw.8.588.1 Branchiostoma floridae e_gw.8.588.1 N 0.897
LOC100057570 Equus caballus ENSECAG00000015558 N 0.896
U2AF1 Meleagris gallopavo ENSMGAG00000014587 N 0.896
Ame_R019749 Ailuropoda melanoleuca Ame_R019749 N 0.896
U2AF1 Ornithorhynchus anatinus ENSOANG00000006463 N 0.896
AAI08559 Xenopus laevis AAI08559 N 0.889
ENSGACG00000003454 Gasterosteus aculeatus ENSGACG00000003454 N 0.889
U2AF1 Loxodonta africana ENSLAFG00000011460 N 0.880
U2AF1 Echinops telfairi ENSETEG00000002200 N 0.880
Q98TR0_CHICK Gallus gallus ENSGALG00000016198 N 0.880
U2AF1 Gasterosteus aculeatus ENSGACG00000014605 N 0.880
U2AF1 Homo sapiens ENSG00000160201 N 0.880
U2AF1 Oryzias latipes ENSORLG00000006182 N 0.880
U2AF1 Tetraodon nigroviridis ENSTNIG00000008311 N 0.880
U2AF1 Tarsius syrichta ENSTSYG00000006799 N 0.880
U2AF1 Taeniopygia guttata ENSTGUG00000005826 N 0.880
U2AF1 Pan troglodytes ENSPTRG00000013952 N 0.880
U2AF1 Macaca mulatta ENSMMUG00000022769 N 0.880
U2AF1 Monodelphis domestica ENSMODG00000021029 N 0.880
U2AF1 Microcebus murinus ENSMICG00000013835 N 0.880
U2af1 Mus musculus ENSMUSG00000061613 N 0.880
U2AF1 Canis familiaris ENSCAFG00000010572 N 0.880
U2AF1 Anolis carolinensis ENSACAG00000017836 N 0.880
LOC100415206 Callithrix jacchus ENSCJAG00000015843 N 0.880
U2AF1_BOVIN Bos taurus ENSBTAG00000011645 N 0.880
U2AF1 Cavia porcellus ENSCPOG00000004893 N 0.880
e_gw1.49.82.1 Lottia gigantea e_gw1.49.82.1 N 0.872
u2af1 Danio rerio ENSDARG00000015325 N 0.872
e_gw.121.26.1 Nematostella vectensis e_gw.121.26.1 N 0.863
U2AF1 Procavia capensis ENSPCAG00000013413 N 0.855
ENSCSAVG00000000329 Ciona savignyi ENSCSAVG00000000329 N 0.855
ENSCING00000004086 Ciona intestinalis ENSCING00000004086 N 0.855
XP_002156010.1 Hydra magnipapillata XP_002156010.1 N 0.851
ENSORLG00000008857 Oryzias latipes ENSORLG00000008857 N 0.846
estExt_Genewise1.C_3650003 Capitella teleta estExt_Genewise1.C_3650003 N 0.846
U2AF1 Takifugu rubripes ENSTRUG00000013815 N 0.846
184981 Helobdella robusta 184981 N 0.821
PHUM349680 Pediculus humanus PHUM349680 N 0.821
BGIBMGA010333 Bombyx mori BGIBMGA010333 N 0.821
e_gw1.30.183.1 Daphnia pulex e_gw1.30.183.1 N 0.821
nasonia_NCBI_hmm622923 Nasonia vitripennis nasonia_NCBI_hmm622923 N 0.821
U2AF1L4 Sus scrofa ENSSSCG00000002896 N 0.814
U2AF1L4 Monodelphis domestica ENSMODG00000014003 N 0.814
e_gw1.35.104.1 Trichoplax adhaerens e_gw1.35.104.1 N 0.814
U2af1l4 Rattus norvegicus ENSRNOG00000024497 N 0.814
U2AF1L4 Loxodonta africana ENSLAFG00000012923 N 0.814
U2AF1L4 Equus caballus ENSECAG00000017941 N 0.814
U2af1l4 Mus musculus ENSMUSG00000078765 N 0.814
U2AF4_BOVIN Bos taurus ENSBTAG00000023610 N 0.814
U2AF1L4 Oryctolagus cuniculus ENSOCUG00000013434 N 0.814
amel4_ncbi_hmm38272 Apis mellifera amel4_ncbi_hmm38272 N 0.812
Aqu1.219575 Amphimedon queenslandica Aqu1.219575 N 0.812
Smp_093100 Schistosoma mansoni Smp_093100 N 0.810
AGAP002956 Anopheles gambiae AGAP002956 N 0.803
CpipJ_CPIJ016711 Culex pipiens CpipJ_CPIJ016711 N 0.803
CPIJ016711 Culex quinquefasciatus CPIJ016711 N 0.803
AAEL006713 Aedes aegypti AAEL006713 N 0.803
CPIJ003901 Culex quinquefasciatus CPIJ003901 N 0.803
CpipJ_CPIJ003901 Culex pipiens CpipJ_CPIJ003901 N 0.803
ENSGGOG00000025487 Gorilla gorilla ENSGGOG00000025487 N 0.802
U2AF1L4 Gorilla gorilla ENSGGOG00000016828 N 0.797
Q9YHU4_FUGRU Takifugu rubripes ENSTRUG00000010538 N 0.795
ENSTNIG00000013914 Tetraodon nigroviridis ENSTNIG00000013914 N 0.795
GD22967 Drosophila simulans FBgn0194360 N 0.795
GJ17240 Drosophila virilis FBgn0204416 N 0.795
GK14823 Drosophila willistoni FBgn0216828 N 0.795
GE16227 Drosophila yakuba FBgn0233767 N 0.795
GL25824 Drosophila persimilis FBgn0163408 N 0.795
GM16679 Drosophila sechellia FBgn0171592 N 0.795
GA17536-RA Drosophila pseudoobscura FBgn0077547 N 0.795
GI15018 Drosophila mojavensis FBgn0137768 N 0.795
GF24893 Drosophila ananassae FBgn0101885 N 0.795
U2af38 Drosophila melanogaster FBgn0017457 N 0.795
GH10217 Drosophila grimshawi FBgn0117698 N 0.795
GG24659 Drosophila erecta FBgn0116791 N 0.795
XP_002167624.1 Hydra magnipapillata XP_002167624.1 N 0.789
U2AF1L4 Homo sapiens ENSG00000161265 N 0.788
U2AF1L4 Pan troglodytes ENSPTRG00000010860 N 0.783
Sjc_0045900 Schistosoma japonicum Sjc_0045900 N 0.778
ENSGGOG00000000469 Gorilla gorilla ENSGGOG00000000469 N 0.772
PTSG_08923 Salpingoeca rosetta PTSG_08923 N 0.769
SPPG_02695 Spizellomyces punctatus SPPG_02695 N 0.756
DGIL_AUG5s4512g5t1 Acyrtosiphon pisum DGIL_AUG5s4512g5t1 N 0.740
ISCW019664 Ixodes scapularis ISCW019664 N 0.735
Aqu1.226671 Amphimedon queenslandica Aqu1.226671 N 0.714
WUBG_02195 Wuchereria bancrofti WUBG_02195 N 0.709
Bm1_55710 Brugia malayi Bm1_55710 N 0.709
LOAG_00486 Loa loa LOAG_00486 N 0.709
CRE28738 Caenorhabditis remanei CRE28738 N 0.703
CBN00865 Caenorhabditis brenneri CBN00865 N 0.703
CBG00419 Caenorhabditis briggsae CBG00419 N 0.703
uaf-2 Caenorhabditis elegans Y116A8C.35 N 0.703