LOAG_00486 (Loa loa)
CCCH ZF,RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH)
PF00076 (RRM_1) 		IPR000571
IPR000504 		LOAG_00486 T00293_0.6 Broad (2011-Oct-27)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
LOAG_00486T0 CCCH ZF 129 155
LOAG_00486T0 RRM 198 258
LOAG_00486T0 CCCH ZF 267 292

Links

Other CCCH ZF,RRM family RBPs
Other Loa loa RBPs

69 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Bm1_55710 Brugia malayi Bm1_55710 N 0.982
WUBG_02195 Wuchereria bancrofti WUBG_02195 N 0.982
CRE28738 Caenorhabditis remanei CRE28738 N 0.861
CBN00865 Caenorhabditis brenneri CBN00865 N 0.861
uaf-2 Caenorhabditis elegans Y116A8C.35 N 0.861
CBG00419 Caenorhabditis briggsae CBG00419 N 0.861
Ppa-uaf-2 Pristionchus pacificus PPA01467 N 0.846
Minc02944 Meloidogyne incognita Minc02944 N 0.807
e_gw.8.587.1 Branchiostoma floridae e_gw.8.587.1 N 0.767
e_gw.8.588.1 Branchiostoma floridae e_gw.8.588.1 N 0.767
AAI08559 Xenopus laevis AAI08559 N 0.767
U2AF1 Macaca mulatta ENSMMUG00000022769 N 0.750
U2AF1 Monodelphis domestica ENSMODG00000021029 N 0.750
U2AF1 Loxodonta africana ENSLAFG00000011460 N 0.750
U2AF1 Oryzias latipes ENSORLG00000006182 N 0.750
U2AF1 Microcebus murinus ENSMICG00000013835 N 0.750
U2AF1 Tarsius syrichta ENSTSYG00000006799 N 0.750
Q98TR0_CHICK Gallus gallus ENSGALG00000016198 N 0.750
U2AF1 Tetraodon nigroviridis ENSTNIG00000008311 N 0.750
U2AF1 Taeniopygia guttata ENSTGUG00000005826 N 0.750
U2AF1 Pan troglodytes ENSPTRG00000013952 N 0.750
U2af1 Mus musculus ENSMUSG00000061613 N 0.750
U2AF1 Cavia porcellus ENSCPOG00000004893 N 0.750
U2AF1 Echinops telfairi ENSETEG00000002200 N 0.750
U2AF1_BOVIN Bos taurus ENSBTAG00000011645 N 0.750
U2AF1 Anolis carolinensis ENSACAG00000017836 N 0.750
U2AF1 Homo sapiens ENSG00000160201 N 0.750
Bm1_56100 Brugia malayi Bm1_56100 N 0.748
WUBG_09132 Wuchereria bancrofti WUBG_09132 N 0.748
LOAG_10291 Loa loa LOAG_10291 N 0.748
u2af1 Danio rerio ENSDARG00000015325 N 0.741
e_gw1.49.82.1 Lottia gigantea e_gw1.49.82.1 N 0.741
U2AF1 Gasterosteus aculeatus ENSGACG00000014605 N 0.741
ENSGACG00000003454 Gasterosteus aculeatus ENSGACG00000003454 N 0.741
LOC100415206 Callithrix jacchus ENSCJAG00000015843 N 0.733
e_gw.121.26.1 Nematostella vectensis e_gw.121.26.1 N 0.733
U2AF1 Tupaia belangeri ENSTBEG00000000453 N 0.724
ENSCSAVG00000000329 Ciona savignyi ENSCSAVG00000000329 N 0.724
U2AF1 Vicugna pacos ENSVPAG00000002856 N 0.724
U2AF1 Canis familiaris ENSCAFG00000010572 N 0.724
ENSCING00000004086 Ciona intestinalis ENSCING00000004086 N 0.724
Ame_R019749 Ailuropoda melanoleuca Ame_R019749 N 0.724
U2AF1 Spermophilus tridecemlineatus ENSSTOG00000012766 N 0.724
U2AF1 Myotis lucifugus ENSMLUG00000014756 N 0.724
LOC100057570 Equus caballus ENSECAG00000015558 N 0.724
U2AF1 Meleagris gallopavo ENSMGAG00000014587 N 0.724
U2af1 Dipodomys ordii ENSDORG00000000211 N 0.724
U2AF1 Ornithorhynchus anatinus ENSOANG00000006463 N 0.724
U2AF1 Pteropus vampyrus ENSPVAG00000016992 N 0.724
ENSORLG00000008857 Oryzias latipes ENSORLG00000008857 N 0.724
U2AF1 Procavia capensis ENSPCAG00000013413 N 0.724
U2AF4_BOVIN Bos taurus ENSBTAG00000023610 N 0.718
U2AF1L4 Equus caballus ENSECAG00000017941 N 0.718
U2AF1L4 Sus scrofa ENSSSCG00000002896 N 0.718
U2AF1L4 Monodelphis domestica ENSMODG00000014003 N 0.718
U2af1l4 Mus musculus ENSMUSG00000078765 N 0.718
U2AF1L4 Oryctolagus cuniculus ENSOCUG00000013434 N 0.718
U2AF1L4 Loxodonta africana ENSLAFG00000012923 N 0.718
U2af1l4 Rattus norvegicus ENSRNOG00000024497 N 0.718
XP_002156010.1 Hydra magnipapillata XP_002156010.1 N 0.716
184981 Helobdella robusta 184981 N 0.716
U2AF1 Takifugu rubripes ENSTRUG00000013815 N 0.716
XP_001191705.1 Strongylocentrotus purpuratus XP_001191705.1 N 0.709
nasonia_NCBI_hmm622923 Nasonia vitripennis nasonia_NCBI_hmm622923 N 0.707
PHUM349680 Pediculus humanus PHUM349680 N 0.707
e_gw1.30.183.1 Daphnia pulex e_gw1.30.183.1 N 0.707
BGIBMGA010333 Bombyx mori BGIBMGA010333 N 0.707
U2AF1L4 Homo sapiens ENSG00000161265 N 0.701
U2AF1L4 Gorilla gorilla ENSGGOG00000016828 N 0.701