MBNL3 (Pteropus vampyrus)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 ENSPVAG00000006115 T03279_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
MBNL1
M320_0.6 		Homo sapiens YYYGCUKY; YGCY SELEX
Cook et al.(2011)
669_20071745 		0.809
MBNL1
M037_0.6 		Homo sapiens GCUUGC RNAcompete
Ray et al.(2013)
RNCMPT00038 		0.809
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSPVAP00000005780 CCCH ZF 17 41
ENSPVAP00000005780 CCCH ZF 58 73
ENSPVAP00000005780 CCCH ZF 175 200
ENSPVAP00000005780 CCCH ZF 208 231

Links

Other CCCH ZF family RBPs
Other Pteropus vampyrus RBPs

110 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
MBNL3 Macaca mulatta ENSMMUG00000003071 I 0.895
MBNL3 Loxodonta africana ENSLAFG00000011822 I 0.895
MBNL3 Gorilla gorilla ENSGGOG00000007756 I 0.895
MBNL3 Homo sapiens ENSG00000076770 I 0.895
ENSPPYG00000020726 Pongo pygmaeus ENSPPYG00000020726 I 0.895
LOC100397507 Callithrix jacchus ENSCJAG00000004080 I 0.884
LOC100054316 Equus caballus ENSECAG00000021076 I 0.884
MBNL3 Bos taurus ENSBTAG00000014088 I 0.884
MBNL3 Canis familiaris ENSCAFG00000018841 I 0.884
MBNL3 Myotis lucifugus ENSMLUG00000016240 I 0.884
MBNL3 Tursiops truncatus ENSTTRG00000016841 I 0.884
MBNL3 Oryctolagus cuniculus ENSOCUG00000014979 I 0.884
MBNL3 Vicugna pacos ENSVPAG00000004743 I 0.884
MBNL3 Spermophilus tridecemlineatus ENSSTOG00000006715 I 0.884
MBNL3 Sorex araneus ENSSARG00000006397 I 0.874
MBNL3 Dasypus novemcinctus ENSDNOG00000016518 I 0.863
Ame_R011226 Ailuropoda melanoleuca Ame_R011226 I 0.853
MBNL3 Macropus eugenii ENSMEUG00000001183 I 0.853
MBNL3 Monodelphis domestica ENSMODG00000015304 I 0.853
Mbnl3 Mus musculus ENSMUSG00000036109 I 0.853
MBNL3 Ornithorhynchus anatinus ENSOANG00000011697 I 0.853
A5HMN7_CHICK Gallus gallus ENSGALG00000006066 I 0.853
MBNL3 Taeniopygia guttata ENSTGUG00000002999 I 0.853
mbnl3 Xenopus tropicalis ENSXETG00000005409 I 0.853
MBNL3 Meleagris gallopavo ENSMGAG00000003064 I 0.853
MBNL3 Microcebus murinus ENSMICG00000017340 I 0.842
MBNL3 Anolis carolinensis ENSACAG00000009557 I 0.842
Mbnl3 Dipodomys ordii ENSDORG00000012854 I 0.832
MBNL3_FUGRU Takifugu rubripes ENSTRUG00000012666 I 0.832
MBNL3 Tetraodon nigroviridis ENSTNIG00000016812 I 0.832
MBNL3 Gasterosteus aculeatus ENSGACG00000017015 I 0.821
Mbnl3 Rattus norvegicus ENSRNOG00000002487 I 0.816
mbnl3 Danio rerio ENSDARG00000016085 I 0.811
mbnl2 Danio rerio ENSDARG00000018460 I 0.800
MBNL1 Oryzias latipes ENSORLG00000005925 I 0.800
ENSORLG00000005419 Oryzias latipes ENSORLG00000005419 I 0.800
MBNL1 Monodelphis domestica ENSMODG00000015838 I 0.800
MBNL3 Oryzias latipes ENSORLG00000002183 I 0.800
ENSGACG00000015105 Gasterosteus aculeatus ENSGACG00000015105 I 0.800
MBN2A_FUGRU Takifugu rubripes ENSTRUG00000010220 I 0.800
MBNL1 Gorilla gorilla ENSGGOG00000009430 I 0.789
MBNL1 Tarsius syrichta ENSTSYG00000010491 I 0.789
MBNL1 Loxodonta africana ENSLAFG00000017683 I 0.789
MBNL1 Takifugu rubripes ENSTRUG00000001892 I 0.789
A3F958_CHICK Gallus gallus ENSGALG00000016890 I 0.789
MBNL1 Tursiops truncatus ENSTTRG00000009991 I 0.789
MBNL1 Anolis carolinensis ENSACAG00000008014 I 0.789
MBNL1_CHICK Gallus gallus ENSGALG00000010361 I 0.789
MBNL2 Meleagris gallopavo ENSMGAG00000014904 I 0.789
MBNL1 Taeniopygia guttata ENSTGUG00000011341 I 0.789
MBNL1 Oryctolagus cuniculus ENSOCUG00000007601 I 0.789
MBNL1 Ochotona princeps ENSOPRG00000009633 I 0.789
MBNL1 Vicugna pacos ENSVPAG00000006162 I 0.789
Mbnl1 Mus musculus ENSMUSG00000027763 I 0.789
MBNL1 Pan troglodytes ENSPTRG00000015542 I 0.789
MBNL2 Taeniopygia guttata ENSTGUG00000011104 I 0.789
MBNL1 Macaca mulatta ENSMMUG00000015910 I 0.789
MBNL1 Spermophilus tridecemlineatus ENSSTOG00000009457 I 0.789
MBNL1 Homo sapiens ENSG00000152601 D 0.789
MBNL2 Anolis carolinensis ENSACAG00000000969 I 0.789
ENSPPYG00000014218 Pongo pygmaeus ENSPPYG00000014218 I 0.789
A5PKK4_BOVIN Bos taurus ENSBTAG00000018313 I 0.789
MBNL1 Cavia porcellus ENSCPOG00000011516 I 0.789
MBNL1 Pteropus vampyrus ENSPVAG00000002760 I 0.789
MBNL1 Canis familiaris ENSCAFG00000008603 I 0.789
MBNL1 Dasypus novemcinctus ENSDNOG00000012815 I 0.789
MBNL1 Erinaceus europaeus ENSEEUG00000009449 I 0.789
LOC100050018 Equus caballus ENSECAG00000024349 I 0.789
LOC100392264 Callithrix jacchus ENSCJAG00000001054 I 0.789
Ame_R002664 Ailuropoda melanoleuca Ame_R002664 I 0.779
mbnl1 Xenopus tropicalis ENSXETG00000021655 I 0.779
MBNL2 Procavia capensis ENSPCAG00000005151 I 0.779
ENSPPYG00000005456 Pongo pygmaeus ENSPPYG00000005456 I 0.779
MBNL2 Monodelphis domestica ENSMODG00000008566 I 0.779
MBNL2 Cavia porcellus ENSCPOG00000010320 I 0.779
MBNL2 Sus scrofa ENSSSCG00000009505 I 0.779
MBNL2 Spermophilus tridecemlineatus ENSSTOG00000013149 I 0.779
MBNL2 Oryctolagus cuniculus ENSOCUG00000000220 I 0.779
MBNL2 Ornithorhynchus anatinus ENSOANG00000014911 I 0.779
MBNL2 Sorex araneus ENSSARG00000002868 I 0.779
MBNL2 Ochotona princeps ENSOPRG00000007427 I 0.779
LOC100403733 Callithrix jacchus ENSCJAG00000004294 I 0.779
MBNL1 Myotis lucifugus ENSMLUG00000014029 I 0.779
MBNL2 Echinops telfairi ENSETEG00000003784 I 0.779
MBNL2 Pteropus vampyrus ENSPVAG00000003263 I 0.779
MBNL1 Takifugu rubripes ENSTRUG00000013858 I 0.779
MBNL2 Vicugna pacos ENSVPAG00000010696 I 0.779
MBNL2 Tursiops truncatus ENSTTRG00000008491 I 0.779
MBNL1 Gasterosteus aculeatus ENSGACG00000015003 I 0.779
MBNL2 Homo sapiens ENSG00000139793 I 0.779
MBNL2 Loxodonta africana ENSLAFG00000014497 I 0.779
MBNL2 Gorilla gorilla ENSGGOG00000008349 I 0.779
MBNL2 Canis familiaris ENSCAFG00000005523 I 0.779
MBNL1 Tetraodon nigroviridis ENSTNIG00000003878 I 0.779
MBNL2 Pan troglodytes ENSPTRG00000005982 I 0.779
MBNL1 Oryzias latipes ENSORLG00000015858 I 0.768
ENSGACG00000004222 Gasterosteus aculeatus ENSGACG00000004222 I 0.768
MBNL1 Gasterosteus aculeatus ENSGACG00000010253 I 0.768
MBNL1 Macropus eugenii ENSMEUG00000006617 I 0.768
MBNL2 Tarsius syrichta ENSTSYG00000004574 I 0.768
Mbnl2 Mus musculus ENSMUSG00000022139 I 0.768
ENSTNIG00000013977 Tetraodon nigroviridis ENSTNIG00000013977 I 0.768
MBNL2 Choloepus hoffmanni ENSCHOG00000000049 I 0.768
Mbnl2 Rattus norvegicus ENSRNOG00000010737 I 0.768
MBNL2 Erinaceus europaeus ENSEEUG00000006209 I 0.758
ENSTRUG00000017351 Takifugu rubripes ENSTRUG00000017351 I 0.758
MBNL2 Tupaia belangeri ENSTBEG00000005178 I 0.737
MBNL2 Macropus eugenii ENSMEUG00000016143 I 0.737
XP_001194015.1 Strongylocentrotus purpuratus XP_001194015.1 I 0.731
MBNL2 Myotis lucifugus ENSMLUG00000010920 I 0.716