Pc20g08250 (Penicillium chrysogenum)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 Pc20g08250 T06455_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
Pc20g08250.t1 CCCH ZF 42 67
Pc20g08250.t1 CCCH ZF 72 95

Links

Other CCCH ZF family RBPs
Other Penicillium chrysogenum RBPs

35 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
An11g11070 Aspergillus niger CADANGAG00009424 N 0.980
AFUA_3G05570 Aspergillus fumigatus CADAFUAG00005783 N 0.980
AFLA_103810 Aspergillus flavus CADAFLAG00012116 N 0.980
AO090020000028 Aspergillus oryzae CADAORAG00006562 N 0.980
fgenesh1_pm.00118_#_26 Aspergillus carbonarius fgenesh1_pm.00118_#_26 N 0.980
NFIA_071620 Neosartorya fischeri CADNFIAG00006536 N 0.980
ATEG_08978 Aspergillus terreus CADATEAG00006440 N 0.980
PABG_05614 Paracoccidioides brasiliensis PABG_05614 N 0.960
PMAA_005110 Penicillium marneffei PMAA_005110 N 0.960
CIMG_10872 Coccidioides immitis CIMG_10872 N 0.960
ANIA_03447 Aspergillus nidulans CADANIAG00009587 N 0.960
CPSG_06815 Coccidioides posadasii CPSG_06815 N 0.960
UREG_06970 Uncinocarpus reesii UREG_06970 N 0.960
HCAG_10294 Histoplasma capsulatum HCAG_10294 N 0.960
ACLA_033580 Aspergillus clavatus CADACLAG00003610 N 0.941
TEQG_01582 Trichophyton equinum TEQG_01582 N 0.940
TERG_02518 Trichophyton rubrum TERG_02518 N 0.940
MGYG_05636 Microsporum gypseum MGYG_05636 N 0.940
MCYG_08235 Microsporum canis MCYG_08235 N 0.940
SNOG_02658 Stagonospora nodorum SNOG_02658 N 0.820
AB08315.1 Alternaria brassicicola AB08315.1 N 0.820
EAT89389.2 Phaeosphaeria nodorum EAT89389.2 N 0.820
PTRG_01963 Pyrenophora tritici repentis PTRG_01963 N 0.820
estExt_fgenesh1_pg.C_160206 Cochliobolus heterostrophus C5 estExt_fgenesh1_pg.C_160206 N 0.820
GSTUMT00003772001 Tuber melanosporum GSTUMT00003772001 N 0.804
ADR062W Ashbya gossypii ADR062W N 0.765
SAKL0H10846g Lachancea kluyveri SAKL0H10846g N 0.765
YALI0B12540g Yarrowia lipolytica YALI0B12540g N 0.745
KLTH0E11836g Kluyveromyces thermotolerans KLTH0E11836g N 0.706
VDAG_09556 Verticillium dahliae VDAG_09556 N 0.706
CTRG_02259 Candida tropicalis CTRG_02259 N 0.706
FOXG_04082 Fusarium oxysporum FOXG_04082 N 0.706
FVEG_07196 Fusarium verticillioides FVEG_07196 N 0.706
VDBG_09822 Verticillium albo atrum VDBG_09822 N 0.706
25080_YPL054W Saccharomyces bayanus 25080_YPL054W N 0.706